index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
about
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
gn3
/
computations
Age
Commit message (
Expand
)
Author
2021-08-30
Implement module for interfacing with rust-qtlreaper
Muriithi Frederick Muriuki
2021-08-27
Provide intermediate data in final results
Muriithi Frederick Muriuki
2021-08-27
Export trait data to file
Muriithi Frederick Muriuki
2021-08-27
Rework strains and trait values retrieval
Muriithi Frederick Muriuki
2021-08-20
Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_gener...
Muriithi Frederick Muriuki
2021-08-20
Fix typing issue(s) caught by mypy
Muriithi Frederick Muriuki
2021-08-20
Retrieve the strains with valid values
Muriithi Frederick Muriuki
2021-08-20
Add tests for ordering and implement function
Muriithi Frederick Muriuki
2021-08-20
Minor correlation fixes (#36)
Alexander Kabui
2021-08-18
Test the clustering
Muriithi Frederick Muriuki
2021-08-18
Fix obvious linting errors
Muriithi Frederick Muriuki
2021-08-18
Make child sequence a list
Muriithi Frederick Muriuki
2021-08-18
Add tests and fix errors caught with tests
Muriithi Frederick Muriuki
2021-08-17
Test the clustering
Muriithi Frederick Muriuki
2021-08-17
Fix obvious linting errors
Muriithi Frederick Muriuki
2021-08-17
Make child sequence a list
Muriithi Frederick Muriuki
2021-08-17
Add tests and fix errors caught with tests
Muriithi Frederick Muriuki
2021-08-16
Merge pull request #32 from genenetwork/heatmap_decompose_db_retrieval
BonfaceKilz
2021-08-12
Fix linting errors
Muriithi Frederick Muriuki
2021-08-12
Import missing definitions
Muriithi Frederick Muriuki
2021-08-11
use normal function for correlation (#34)
Alexander Kabui
2021-08-09
Build up the heatmap data
Muriithi Frederick Muriuki
2021-08-04
Fix issues caught by pylint
Muriithi Frederick Muriuki
2021-07-29
Add partial type annotations for slink module
Muriithi Frederick Muriuki
2021-07-29
Add partial type annotations for slink module
Muriithi Frederick Muriuki
2021-07-26
Merge branch 'main' of github.com:genenetwork/genenetwork3
Muriithi Frederick Muriuki
2021-07-26
Fix issues caught by pylint
Muriithi Frederick Muriuki
2021-07-26
Check if corr_coefficient is NaN, since apparently it's stored as NaN instead...
zsloan
2021-07-23
Add data examples for `slink`. Implement function.
Muriithi Frederick Muriuki
2021-07-23
Iterate through all valid pairs
Muriithi Frederick Muriuki
2021-07-23
Extract function to flatten list of lists
Muriithi Frederick Muriuki
2021-07-23
Fix issue caught in `nearest` while testing `slink`
Muriithi Frederick Muriuki
2021-07-23
New function (`slink`): return [] on exception
Muriithi Frederick Muriuki
2021-07-23
Add dummy module documentation
Muriithi Frederick Muriuki
2021-07-23
Add docstring for `nearest' function
Muriithi Frederick Muriuki
2021-07-22
Get shortest distance from two lists/tuples of member coordinates
Muriithi Frederick Muriuki
2021-07-22
Extract common `is_list_or_tuple' function
Muriithi Frederick Muriuki
2021-07-22
Test for shortest distance between members in a list and coordinate
Muriithi Frederick Muriuki
2021-07-22
Check that given list and both coordinates, we get shortest distance
Muriithi Frederick Muriuki
2021-07-22
Check that all distances are positive or zero
Muriithi Frederick Muriuki
2021-07-22
Check that distance from A to B is same as from B to A
Muriithi Frederick Muriuki
2021-07-22
Check that child distance from itself is zero
Muriithi Frederick Muriuki
2021-07-22
Check the child lengths are same as length of parent
Muriithi Frederick Muriuki
2021-07-22
Add docstring
Muriithi Frederick Muriuki
2021-07-22
Check that list and its direct children are not empty
Muriithi Frederick Muriuki
2021-07-22
Implement check for lists or tuples
Muriithi Frederick Muriuki
2021-07-21
Extract tests from code in GN1
Muriithi Frederick Muriuki
2021-07-20
Implement the correlation function
Muriithi Frederick Muriuki
2021-07-20
Add test for code to move over from GN1
Muriithi Frederick Muriuki
2021-06-29
Replace list with a tuple as an argument when setting success_codes
BonfaceKilz
[next]