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AgeCommit message (Expand)Author
2021-10-29Fix linting and typing errorsFrederick Muriuki Muriithi
2021-10-29Complete `build_temporary_tissue_correlations_table`Frederick Muriuki Muriithi
2021-10-29Complete implementation of `batch_computed_tissue_correlation`Frederick Muriuki Muriithi
2021-10-29Move `correlations_of_all_tissue_traits`Frederick Muriuki Muriithi
2021-10-29Implement `tissue_correlation` functionFrederick Muriuki Muriithi
2021-10-29Move the function to computations moduleFrederick Muriuki Muriithi
2021-10-29Move the partial_correlations module to gn3.computationsFrederick Muriuki Muriithi
2021-10-25mypy:Incompatible types in assignment fixAlexander Kabui
2021-10-25mypy fix for none stdoutAlexander Kabui
2021-10-25pylint and pep8 formattingAlexander Kabui
2021-10-25fix unittestsAlexander Kabui
2021-10-25minor modification for emitting data:add namespacesAlexander Kabui
2021-10-25pep8 formatting,pylint fixesAlexander Kabui
2021-10-25add socket obj and emit processAlexander Kabui
2021-10-25fix issues serializing byte stringAlexander Kabui
2021-10-25rename key to image_dataAlexander Kabui
2021-10-25add function to process imagesAlexander Kabui
2021-10-25add function to capture output in real timeAlexander Kabui
2021-09-27add file not found exceptionAlexander Kabui
2021-09-27return str error for exceptionAlexander Kabui
2021-09-27fix merge conflictsAlexander Kabui
2021-09-27Narrow the exception and add commentsFrederick Muriuki Muriithi
2021-09-27Update terminology: `strain` to `sample`Frederick Muriuki Muriithi
2021-09-23minor fixes for endpointAlexander Kabui
2021-09-23Return r error if returncode!=0Alexander Kabui
2021-09-23read generated files from r and return outputAlexander Kabui
2021-09-22Fix more pylint errorsFrederick Muriuki Muriithi
2021-09-22Fix typing issuesFrederick Muriuki Muriithi
2021-09-22Fix pylint errorsFrederick Muriuki Muriithi
2021-09-17Fix a number of linting issuesFrederick Muriuki Muriithi
2021-09-16run cmd and add exception handlerAlexander Kabui
2021-09-16add function to compose and run wgcna scriptAlexander Kabui
2021-09-16function to parse form data and write to json fileAlexander Kabui
2021-09-15init wgcna file to run r script and preprocess dataAlexander Kabui
2021-09-15Reorganise modulesFrederick Muriuki Muriithi
2021-09-08Ease search for traits and chromosomesMuriithi Frederick Muriuki
2021-09-08Parse Chr value as int where possibleMuriithi Frederick Muriuki
2021-09-08Remove extraneous text to ease sortingMuriithi Frederick Muriuki
2021-09-08Fix the traits order computations for clusteringMuriithi Frederick Muriuki
2021-09-06Provide function to organise parsed QTLReaper resultsMuriithi Frederick Muriuki
2021-09-06Leave "Chr" value as string when parsingMuriithi Frederick Muriuki
2021-09-06Handle type-coercion exceptionsMuriithi Frederick Muriuki
2021-09-06Find nearest markerMuriithi Frederick Muriuki
2021-08-31Fix linting errors, minor bugs and reorganise codeMuriithi Frederick Muriuki
2021-08-31Update `heatmap_data` function: remove extraneous dataMuriithi Frederick Muriuki
2021-08-31Parse QTLReaper outputsMuriithi Frederick Muriuki
2021-08-31Fix bugs with `run_reaper` functionMuriithi Frederick Muriuki
2021-08-30Fix issues with traits file formatMuriithi Frederick Muriuki
2021-08-30Remove empty lineMuriithi Frederick Muriuki
2021-08-30Fix some linting errors and minor bugs.Muriithi Frederick Muriuki
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