| Age | Commit message (Expand) | Author |
|---|---|---|
| 2022-03-22 | Fixes pylint errors | zsloan |
| 2022-03-22 | Fixed mypy typing errors | zsloan |
| 2022-03-22 | Tried to make the docstrings more consistent | zsloan |
| 2022-03-22 | Add typing to some functions | zsloan |
| 2022-03-22 | Add functions for getting proximal/distal markers for each pseudomarker posit... | zsloan |
| 2022-03-22 | Added genofile name to inputs for processing R/qtl pair-scan results, since i... | zsloan |
| 2022-03-22 | Removed quotes from beginning and end of chromosome string | zsloan |
| 2022-03-22 | Fixed a cople function calls to use the updated function names | zsloan |
| 2022-03-22 | Create pairscan_for_figure and pairscan_for_table functions that return the D... | zsloan |
| 2022-03-22 | Added pairscan boolean kwarg and process_rqtl_pairscan function for reading i... | zsloan |
| 2022-02-24 | gn3: Explicitly specify UTF-8 to be the file encoding....When the encoding is not specified explicitly, the system default encoding is used. This is not recommended. * gn3/computations/ctl.py (call_ctl_script), gn3/computations/gemma.py (generate_pheno_txt_file), gn3/computations/parsers.py (parse_genofile), gn3/computations/partial_correlations.py (partial_correlations_fast), gn3/computations/rqtl.py (process_rqtl_output, process_perm_output), gn3/computations/wgcna.py (dump_wgcna_data, call_wgcna_script), gn3/fs_helpers.py (jsonfile_to_dict): Explicitly specify UTF-8 to be the file encoding. * tests/unit/computations/test_gemma.py (TestGemma.test_generate_pheno_txt_file), tests/unit/computations/test_wgcna.py (TestWgcna.test_create_json_file): Test for call to open with encoding='utf-8' argument. | Arun Isaac |
| 2021-06-18 | Fixed pylint issues | zsloan |
| 2021-06-18 | Resolve mypy errors in computations/rqtl.py | zsloan |
| 2021-05-25 | Include code that processes rqtl output files and returns actual results inst... | zsloan |
| 2021-05-19 | Temporarily replace forward-slashes with underscores, since they can be inclu... | zsloan |
| 2021-05-18 | Fixed generate_rqtl_cmd to make the kwarg hash from a combination of keywords... | zsloan |
| 2021-05-18 | Fixed variety of issues detected by pylint | zsloan |
| 2021-05-17 | Created compose_rqtl_command and generate_rqtl_command to create the actual c... | zsloan |
 |
index : genenetwork3 | |
| GeneNetwork3 REST API for data science and machine learning |
| aboutsummaryrefslogtreecommitdiff |