index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2023-01-18
Pass species and species prefix as a single query argument.
Arun Isaac
2023-01-18
auth: Fix tests after enforcing FOREIGN KEY constraint
Frederick Muriuki Muriithi
2023-01-18
Tolerate WEIGHT operator in parsed search queries.
Arun Isaac
2023-01-18
Implement synteny search.
Arun Isaac
2023-01-18
Support location shorthands in search queries.
Arun Isaac
2023-01-18
Split off search query parsing into separate function.
Arun Isaac
2022-12-06
Use a dataset's name to fetch it's metadata from RDF
Munyoki Kilyungi
2022-11-28
Catch a URLError when virtuoso isn't running at all
Munyoki Kilyungi
2022-11-28
Fix pylint errors
Munyoki Kilyungi
2022-11-28
Fail gracefully when virtuoso is not accessible
Munyoki Kilyungi
2022-11-23
Create a new REST endpoint for fetching a phenotype's metadata
Munyoki Kilyungi
2022-11-02
Re-implement RDF related code to use monads in its own module
Munyoki Kilyungi
2022-10-28
Use Xapian index path from app settings.
Arun Isaac
2022-10-28
Add search.
Arun Isaac
2022-07-28
Add command to run the sample correlations in an external process
Frederick Muriuki Muriithi
2022-05-26
Add Endpoint to get menu items for use in UI
Frederick Muriuki Muriithi
2022-05-24
Run partial correlations with external script
Frederick Muriuki Muriithi
2022-05-24
New script to compute partial correlations
Frederick Muriuki Muriithi
2022-05-21
Fix linting errors
Frederick Muriuki Muriithi
2022-05-16
Run computation in one-shot asynchronous process
Frederick Muriuki Muriithi
2022-05-06
Fix linting and typing errors
Frederick Muriuki Muriithi
2022-05-06
Hook up pcorrs with target traits computations
Frederick Muriuki Muriithi
2022-03-30
Revert "Run json.loads on request.get_json, since request.get_json was just r...
Frederick Muriuki Muriithi
2022-03-28
Run json.loads on request.get_json, since request.get_json was just returning...
zsloan
2022-03-22
Fixes pylint errors
zsloan
2022-03-22
Fix issue that causes R/qtl to always run pair-scan even if pair-scan isn't s...
zsloan
2022-03-22
Added genofile name to inputs for processing R/qtl pair-scan results, since i...
zsloan
2022-03-22
Fix imports to import both process_rqtl_mapping and process_rqtl_pairscan in ...
zsloan
2022-03-22
Added pairscan boolean kwarg and process_rqtl_pairscan function for reading i...
zsloan
2022-03-11
Fix some linting issues
Frederick Muriuki Muriithi
2022-03-08
Fix tests, and issues caught by tests
Frederick Muriuki Muriithi
2022-03-08
Create database connections within context managers
Frederick Muriuki Muriithi
2022-03-04
Automatically decode Redis strings
Frederick Muriuki Muriithi
2022-03-03
Add endpoint for checking state of external processes
Frederick Muriuki Muriithi
2022-03-03
Run partial correlations in an external process
Frederick Muriuki Muriithi
2022-02-21
Fix a myriad of linter issues
Frederick Muriuki Muriithi
2022-02-18
Test partial correlations endpoint with non-existent primary traits
Frederick Muriuki Muriithi
2022-02-17
Test partial correlations endpoint with missing data in POST request
Frederick Muriuki Muriithi
2022-02-02
response object error fix
Alexander Kabui
2022-02-02
pep8 formatting
Alexander Kabui
2022-02-02
return 401 on request fail
Alexander Kabui
2022-02-02
pep8 formatting
Alexander Kabui
2022-02-02
new line fix
Alexander Kabui
2022-01-22
generate required json data for ctl api
Alexander Kabui
2022-01-22
add endpoint for ctl
Alexander Kabui
2022-01-10
Convert NaN to None
Frederick Muriuki Muriithi
2021-12-24
Replace `NaN` with `null` in JSON string
Frederick Muriuki Muriithi
2021-12-24
Encode the data to JSON and set the status code
Frederick Muriuki Muriithi
2021-12-24
Add API endpoint for partial correlations
Frederick Muriuki Muriithi
2021-12-17
Add API endpoint for partial correlations
Frederick Muriuki Muriithi
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