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genenetwork3
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auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2025-01-09
refactor: import streaming functionality from module.
Alexander_Kabui
2025-01-09
feat: Add function to run an external process and capture result in a file.
Alexander_Kabui
2025-01-09
feat: Init add streaming module for genenetwork3.
Alexander_Kabui
2025-01-08
refactor: Modify error message for run_process function.
Alexander_Kabui
2025-01-08
refactor: Return results as dict with correct metadata for subprocess.
Alexander_Kabui
2025-01-08
refactor: Pass arg commands to subprocess as a list.
Alexander_Kabui
2025-01-07
feat: Revert commit 688d6a4.
Alexander_Kabui
2025-01-07
feat: remove shell True to for debug.
Alexander_Kabui
2025-01-06
feat: Add print statements for start and end of qtl script run.
Alexander_Kabui
2025-01-02
Revert "Add missing commas to make `install_requires` a list of packages."
Frederick Muriuki Muriithi
2025-01-02
Revert "DEBUG: Guix build failure at `sanity-check` phase."
Frederick Muriuki Muriithi
2025-01-02
DEBUG: Guix build failure at `sanity-check` phase.
Frederick Muriuki Muriithi
2025-01-02
Add pytest-mock to list of dependencies for tests.
Frederick Muriuki Muriithi
2025-01-02
Install any JSON files under the `gn3` package.
Frederick Muriuki Muriithi
2025-01-02
Add missing commas to make `install_requires` a list of packages.
Frederick Muriuki Muriithi
2024-12-20
Add todo note for writing rqtl file.
Alexander_Kabui
2024-12-20
Merge pull request #205 from genenetwork/feature/integrate-streaming-api-func...
Alexander Kabui
2024-12-20
fix: Pylint fixes.
Alexander_Kabui
2024-12-20
feat: Enable streaming for output.
Alexander_Kabui
2024-12-20
feat: Enable verbose for script by default.
Alexander_Kabui
2024-12-17
feat: Init integrate streaming functionality to rqtl1.
Alexander_Kabui
2024-12-13
fix: Fix unused variables pylint.
Alexander_Kabui
2024-12-13
Fix pylint error line too long.
Alexander_Kabui
2024-12-13
fix: Fetch the correct value from rqtl output file for permutation.
Alexander_Kabui
2024-12-12
Remove quote marks for qtl output.
Munyoki Kilyungi
2024-12-12
Fetch RSCRIPT command from global environment variable.
Munyoki Kilyungi
2024-12-07
Check whether genofile/phenofile exist separately.
Munyoki Kilyungi
2024-12-04
Temp disable with for test Popen processes.
Alexander_Kabui
2024-12-04
refactor: make pylint fixes.
Alexander_Kabui
2024-12-04
Merge pull request #203 from genenetwork/feature/rqtl2-endpoints-with-files
Alexander Kabui
2024-12-02
Fix probeset metadata query to include dataset name
zsloan
2024-11-28
feat: define general endpoint for streaming stdout using unique identifier.
Alexander_Kabui
2024-11-27
feat: return run id for compute and streaming api's.
Alexander_Kabui
2024-11-26
feat: Implement reading from file functionality
Alexander_Kabui
2024-11-22
feat: return pointer position from where the file was last read.
Alexander_Kabui
2024-11-22
feat: Add new endpoint to read stdout given a file identifier.
Alexander_Kabui
2024-11-22
feat: register rqtl2 blueprint to app.
Alexander_Kabui
2024-11-22
feat: implement ednpoint for computing qtl using rqtl2.
Alexander_Kabui
2024-11-20
Merge pull request #201 from genenetwork/feature/rqtl2-implementation
Alexander Kabui
2024-11-15
Fix bug where case attribute editing didn't work if a case attribute was
zsloan
2024-11-14
Fix auth endpoint for case attribute editing
zsloan
2024-11-14
Fix case attribute query
zsloan
2024-11-12
Remove unused setting.
Frederick Muriuki Muriithi
2024-11-12
Remove unused import.
Frederick Muriuki Muriithi
2024-11-12
mypy: Rename and annotate variables to silence mypy
Frederick Muriuki Muriithi
2024-11-12
Pure aesthetics: No functional change.
Frederick Muriuki Muriithi
2024-11-11
Allow extra database connection options on URI
Frederick Muriuki Muriithi
2024-11-11
feat: add step to insert pseudomarkers to the gmap.
Alexander_Kabui
2024-11-11
fix: fix issue fetching covar:
Alexander_Kabui
2024-11-11
refactor: rename dataset to cross.
Alexander_Kabui
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