aboutsummaryrefslogtreecommitdiff
AgeCommit message (Expand)Author
2021-07-30Return dict from query functionsMuriithi Frederick Muriuki
2021-07-30Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...Muriithi Frederick Muriuki
2021-07-29Merge pull request #30 from genenetwork/Feature/Update-db-from-csv-dataBonfaceKilz
2021-07-29Merge branch 'main' into Feature/Update-db-from-csv-dataBonfaceKilz
2021-07-29Delete "update_raw" and it's test-casesBonfaceKilz
2021-07-29Add method for updating values from a sample datasetBonfaceKilz
2021-07-29Add partial type annotations for slink moduleMuriithi Frederick Muriuki
2021-07-29Add type annotations to the functionMuriithi Frederick Muriuki
2021-07-29Retrieve trait informationMuriithi Frederick Muriuki
2021-07-29Make name retrieval more generalMuriithi Frederick Muriuki
2021-07-29Retrieve 'ProbeSet' trait nameMuriithi Frederick Muriuki
2021-07-29Add partial type annotations for slink moduleMuriithi Frederick Muriuki
2021-07-29Add type annotations to the functionMuriithi Frederick Muriuki
2021-07-29db: traits: Remove publishdata columnBonfaceKilz
2021-07-28Retrieve trait informationMuriithi Frederick Muriuki
2021-07-28Make name retrieval more generalMuriithi Frederick Muriuki
2021-07-28Retrieve 'ProbeSet' trait nameMuriithi Frederick Muriuki
2021-07-26tests: test_db: Add test case for "update_raw"BonfaceKilz
2021-07-26gn3: db: Create a raw update queryBonfaceKilz
2021-07-26db: traits: Fetch sample_data from a trait in csv formBonfaceKilz
2021-07-26Merge branch 'main' of github.com:genenetwork/genenetwork3Muriithi Frederick Muriuki
2021-07-26Fix issues caught by pylintMuriithi Frederick Muriuki
2021-07-26db: traits: Remove unused functionsBonfaceKilz
2021-07-26Check if corr_coefficient is NaN, since apparently it's stored as NaN instead...zsloan
2021-07-23sql: metadata_audit: Make char-set encoding explicit(utf8mb4)BonfaceKilz
2021-07-23Add data examples for `slink`. Implement function.Muriithi Frederick Muriuki
2021-07-23Add more test dataMuriithi Frederick Muriuki
2021-07-23Iterate through all valid pairsMuriithi Frederick Muriuki
2021-07-23Extract function to flatten list of listsMuriithi Frederick Muriuki
2021-07-23Fix issue caught in `nearest` while testing `slink`Muriithi Frederick Muriuki
2021-07-23New function (`slink`): return [] on exceptionMuriithi Frederick Muriuki
2021-07-23Add dummy module documentationMuriithi Frederick Muriuki
2021-07-23Add docstring for `nearest' functionMuriithi Frederick Muriuki
2021-07-22Get shortest distance from two lists/tuples of member coordinatesMuriithi Frederick Muriuki
2021-07-22Extract common `is_list_or_tuple' functionMuriithi Frederick Muriuki
2021-07-22Test for shortest distance between members in a list and coordinateMuriithi Frederick Muriuki
2021-07-22Merge branch 'main' of github.com:genenetwork/genenetwork3Muriithi Frederick Muriuki
2021-07-22Check that given list and both coordinates, we get shortest distanceMuriithi Frederick Muriuki
2021-07-22Check that all distances are positive or zeroMuriithi Frederick Muriuki
2021-07-22Check that distance from A to B is same as from B to AMuriithi Frederick Muriuki
2021-07-22Move sql updates into dirPjotr Prins
2021-07-22Check that child distance from itself is zeroMuriithi Frederick Muriuki
2021-07-22Check the child lengths are same as length of parentMuriithi Frederick Muriuki
2021-07-22Add docstringMuriithi Frederick Muriuki
2021-07-22Check that list and its direct children are not emptyMuriithi Frederick Muriuki
2021-07-22Implement check for lists or tuplesMuriithi Frederick Muriuki
2021-07-22sql: Add schema and schema map.Arun Isaac
2021-07-21Extract tests from code in GN1Muriithi Frederick Muriuki
2021-07-20Implement the correlation functionMuriithi Frederick Muriuki
2021-07-20Add test for code to move over from GN1Muriithi Frederick Muriuki