index
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genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2024-09-27
Debug command.
Frederick Muriuki Muriithi
2024-09-27
Skip failing test.
Frederick Muriuki Muriithi
2024-09-27
Bug: Use absolute paths in place of relative paths.
Frederick Muriuki Muriithi
2024-09-27
Fix Pair-Scan output paths
Frederick Muriuki Muriithi
2024-09-27
Set `include_package_data=True` to install R files too.
Frederick Muriuki Muriithi
2024-09-27
Add a MANIFEST.in to include R scripts.
Frederick Muriuki Muriithi
2024-09-27
Bug: Use absolute path in place of relative path
Frederick Muriuki Muriithi
2024-09-27
Use existing fixture to retrieve settings.
Frederick Muriuki Muriithi
2024-09-27
Fix R/qtl output paths
zsloan
2024-09-23
Revert "Add pytest.mark.unit_test for all rdf test-cases."
Munyoki Kilyungi
2024-09-23
Add pytest.mark.unit_test for all rdf test-cases.
Munyoki Kilyungi
2024-09-23
Handle missing GN3_SECRETS for CI testing.
Munyoki Kilyungi
2024-09-23
Fix or ignore pylint errors.
Munyoki Kilyungi
2024-09-23
Revert "Remove one-line if/else statement."
Munyoki Kilyungi
2024-09-23
Add section on setting up virtuoso locally.
Munyoki Kilyungi
2024-09-23
Update docs to use default virtuoso ports.
Munyoki Kilyungi
2024-09-23
Update docs on how to use SPARQL default ports.
Munyoki Kilyungi
2024-09-23
Remove one-line if/else statement.
Munyoki Kilyungi
2024-09-23
Load GN3_SECRETS after loading GN3_CONF settings.
Munyoki Kilyungi
2024-09-23
Remove dead comment.
Munyoki Kilyungi
2024-09-23
Make sure the the test graph is empty before running rdf tests.
Munyoki Kilyungi
2024-09-23
Update docs to highlight sparql conf params in SECRETS file.
Munyoki Kilyungi
2024-09-23
Use correct object modifier for a label when inserting a comment.
Munyoki Kilyungi
2024-09-23
Update docstring for "update_wiki_comment".
Munyoki Kilyungi
2024-09-23
Use correct object modifier in triple when fetching comment history.
Munyoki Kilyungi
2024-09-23
Use test fixtures to set-up a test named graph.
Munyoki Kilyungi
2024-09-23
Add RDF test cases.
Munyoki Kilyungi
2024-09-23
Use correct modifier when getting species name in SPARQL.
Munyoki Kilyungi
2024-09-23
Remove dead variable from RDF query.
Munyoki Kilyungi
2024-09-23
Alphabetically sort the categories and pubmed_ids array.
Munyoki Kilyungi
2024-09-23
Remove un-necessary triple in comment history RDF query.
Munyoki Kilyungi
2024-09-19
Use correct return type.
Munyoki Kilyungi
2024-09-19
Remove extraneous keyword.
Munyoki Kilyungi
2024-09-18
Pass in insert_dict instead of payload in "get_wiki_entries".
Munyoki Kilyungi
2024-09-18
Pass in the createtime as an arg when inserting into RDF graph.
Munyoki Kilyungi
2024-09-18
Get the next versionId from SQL.
Munyoki Kilyungi
2024-09-18
Update docs with extra conf vars for updating virtuoso.
Munyoki Kilyungi
2024-09-18
Update "POST /wiki/comment_id/edit" to have RDF edits.
Munyoki Kilyungi
2024-09-18
Fix typo.
Munyoki Kilyungi
2024-09-18
Add method that inserts new RIF comments.
Munyoki Kilyungi
2024-09-18
Fetch symbol by it's name.
Munyoki Kilyungi
2024-09-18
Fetch the next comment version in RDF.
Munyoki Kilyungi
2024-09-18
Rename sparql_construct_query -> sparql_query.
Munyoki Kilyungi
2024-09-18
Add new method for updating RDF Graph content.
Munyoki Kilyungi
2024-09-18
Run python-black against file.
Munyoki Kilyungi
2024-09-17
Fix C0411/C0412 pylint errors in gn3.api.metadata.api.wiki.
Munyoki Kilyungi
2024-09-17
fix: error when result dict contains None
John Nduli
2024-09-17
feat: require auth for edit api call
John Nduli
2024-09-12
Fix pylint errors.
Munyoki Kilyungi
2024-09-12
feat: pick results from sqlite3 if they were stored
John Nduli
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