genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2024-08-26	Replace map with list comprehension.	Munyoki Kilyungi
2024-08-26	Fetch all the wiki entries by symbol.	Munyoki Kilyungi
2024-08-26	Move constants to their own file.	Munyoki Kilyungi
2024-08-26	Run autopep8 against file.	Munyoki Kilyungi
2024-08-26	chore: fix pylint errors	John Nduli
2024-08-26	refactor: split out utlities into their modules and change api to use metadata	John Nduli
2024-08-26	refactor: clean up wiki edit implementation	John Nduli
2024-08-26	feat: add support for categories in edit query and clearer errors	John Nduli
2024-08-26	feat: support for edit wiki entry	John Nduli
2024-08-13	Fix pylint errors.	Munyoki Kilyungi
2024-08-09	Use correct stemming strategy when searching.	Munyoki Kilyungi
2024-08-09	Add RIF/WIKI as search prefixes for XRF/XWK.	Munyoki Kilyungi
2024-08-01	Add logging for helping with troubleshooting.	Frederick Muriuki Muriithi
2024-08-01	Add handler for unhandled exceptions from `gn3.oauth2` module.	Frederick Muriuki Muriithi
2024-08-01	Update case-attribute editing to use new authorisation.	Frederick Muriuki Muriithi
2024-08-01	Add `gn3.oauth2` module to handle authorisations	Frederick Muriuki Muriithi
2024-08-01	Stem group field regardless of case.	Arun Isaac
2024-08-01	Stem all the time.	Arun Isaac
2024-07-23	chore: add logging info	John Nduli
2024-07-23	chore: mypy and pylint fixes	John Nduli
2024-07-23	fix: resolve duplicate errors when updating data	John Nduli
2024-07-23	refactor: clean query for insert	John Nduli
2024-07-23	refactor: clean up insert query	John Nduli
2024-07-23	refactor: reorganize update_rif script to be more pythonic	John Nduli
2024-07-23	chore: fix pylint errors	John Nduli
2024-07-23	refactor: rename addRIf to update_rif_table.py	John Nduli
2024-07-12	Rename hash_rdf_graph -> md5hash_ttl_dir.	Munyoki Kilyungi
2024-07-12	Use correct ttl-dir path when generating checksums.	Munyoki Kilyungi
2024-07-12	fix: remove .py extension for addRif to prevent pylint checks	John Nduli
2024-07-12	refactor: fix mypy and pylint errors	John Nduli
2024-07-12	feat: copy addRif script from genenetwork1	John Nduli
2024-07-08	Pass output directory to R/qtl script instead of pulling it from the	zsloan
2024-07-05	fix: return query error message from xapian	John Nduli
2024-07-03	Return a "-1" if the turtle directory does not exist.	Munyoki Kilyungi
2024-07-03	Generate a checksum for all the ttl files.	Munyoki Kilyungi
2024-07-03	Add type-hints to hash_generif_graph.	Munyoki Kilyungi
2024-07-03	Refactor how the generif md5 sum is calculated and stored in XAPIAN.	Munyoki Kilyungi
2024-07-03	Use correct cache for RIF/Wiki entries.	Munyoki Kilyungi
2024-07-03	feat: drop intermediate folders when running parallel xapian compact	John Nduli
2024-07-03	feat: add support for parallel xapian compact	John Nduli
2024-07-03	feat: index rif and wiki without positions	John Nduli
2024-07-03	feat: drop common words when building rdf caches	John Nduli
2024-07-03	feat: set 67 parallel processes to run in prod	John Nduli
2024-07-03	fix: remove namespaces since child processes copy the rdf caches	John Nduli
2024-07-03	fix: use correct prefix and index key; group wiki cache query	John Nduli
2024-07-03	feat: add wikidata prefix to search api	John Nduli
2024-07-03	feat: add wikidata indexing	John Nduli
2024-07-03	feat: add global wikicache	John Nduli
2024-07-03	feat: add sparql query to get wikidata	John Nduli
2024-06-26	Increase max number of results to 50000 for Xapian search	zsloan