genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2023-04-17	Hook up code to use external search script for phenotypes	Frederick Muriuki Muriithi
2023-04-17	auth: Delete code that is no longer used	Frederick Muriuki Muriithi
2023-04-15	Decouple `gn3.db_utils` from `flask.current_app`.	Frederick Muriuki Muriithi
2023-04-14	auth: Add external script to search for phenotypes	Frederick Muriuki Muriithi
2023-04-14	auth: Disconnect module from flask application	Frederick Muriuki Muriithi
2023-04-12	auth: Enable listing of unlinked genotype/mRNA group data.	Frederick Muriuki Muriithi
2023-04-10	Add search and link for mRNA Assay datasets.	Frederick Muriuki Muriithi
2023-04-10	Migrations for linking genotype files.	Frederick Muriuki Muriithi
2023-04-10	Update expected request key.	Frederick Muriuki Muriithi
2023-04-10	Enable search, filtering out selected, but not linked data	Frederick Muriuki Muriithi
2023-04-08	auth: Link genotype datasets to groups.	Frederick Muriuki Muriithi
2023-04-06	Fix linting issues	Frederick Muriuki Muriithi
2023-04-06	Remove deprecated `gn3.db_utils.database_connector` function	Frederick Muriuki Muriithi
2023-04-05	Enable use of `database_connection` in scripts without current_app	Frederick Muriuki Muriithi
2023-04-04	auth: Search for linking genotype datasets.	Frederick Muriuki Muriithi
2023-04-04	Add tables to link genotype data	Frederick Muriuki Muriithi
2023-03-23	tests: Set up fixture and mock out config variable	Frederick Muriuki Muriithi
2023-03-23	auth: list the species in the database.	Frederick Muriuki Muriithi
2023-03-23	Docs: Add a note on how the configuration system works.	Frederick Muriuki Muriithi
2023-03-23	auth: Don't try loading the user if no client is found	Frederick Muriuki Muriithi
2023-03-23	conf: use flask.current_app.config not in gn3.settings	Frederick Muriuki Muriithi
2023-03-22	auth: data linking: build functions to fetch unlinked phenotypes	Frederick Muriuki Muriithi
2023-03-22	auth: migrations for linking phenotype data	Frederick Muriuki Muriithi
2023-03-22	auth: Enable linking multiple datasets to the group at once.	Frederick Muriuki Muriithi
2023-03-22	auth: Remove the tables used for linking data to resources	Frederick Muriuki Muriithi
2023-03-20	Disable fetching case-attributes when getting sample data	Munyoki Kilyungi
2023-03-20	auth: data: Enable offset in queries	Frederick Muriuki Muriithi
2023-03-20	auth: data: List Phenotypes at the trait level	Frederick Muriuki Muriithi
2023-03-20	Fix get_all_species test	zsloan
2023-03-18	oauth2: resources: toggle whether a resource is public or not	Frederick Muriuki Muriithi
2023-03-18	auth: resources: Disallow duplicate resource names.	Frederick Muriuki Muriithi
2023-03-17	Add conn.commit() to queries in sample_data.py	zsloan
2023-03-17	Change get_all_species query to order by Family	zsloan
2023-03-15	auth: Data Migrations: Rework migration trigger	Frederick Muriuki Muriithi
2023-03-14	auth: Fix some linting and typing issues.	Frederick Muriuki Muriithi
2023-03-13	Move doc to issue tracker	Pjotr Prins
2023-03-13	oauth2: data: Temporarily escalate privileges to enable migration	Frederick Muriuki Muriithi
2023-03-13	auth: separate user detail migration from data migration	Frederick Muriuki Muriithi
2023-03-13	Add 'ON UPDATE/DELETE' clauses to foreign keys.	Frederick Muriuki Muriithi
2023-03-13	auth: cURL: Add some docs on using cURL	Frederick Muriuki Muriithi
2023-03-10	auth: data-migration: Fix minor bugs	Frederick Muriuki Muriithi
2023-03-09	auth: redis data: migrate data in redis	Frederick Muriuki Muriithi
2023-03-09	auth: data migration: Data migration outline	Frederick Muriuki Muriithi
2023-03-09	auth: introspection: Protect introspection endpoint	Frederick Muriuki Muriithi
2023-03-08	auth: users: Use the same basic functions for password hashing	Frederick Muriuki Muriithi
2023-03-08	Replace Bcrypt with Argon2 for better security.	Frederick Muriuki Muriithi
2023-03-07	auth: group_roles: Enable addition/deletion of privileges	Frederick Muriuki Muriithi
2023-03-07	auth: resources: unassign roles on resource from a user.	Frederick Muriuki Muriithi
2023-03-07	auth: user_by_id: Return a user or raise an exception	Frederick Muriuki Muriithi
2023-03-06	auth: privileges/roles: fix issues caught by tests.	Frederick Muriuki Muriithi