index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2022-12-23
Add a couple necessary environment variables
zsloan
2022-12-22
tests: Setup environment variables and configs
Frederick Muriuki Muriithi
2022-12-22
auth: implement OAuth2 flow.
oauth2_auth_flow
Frederick Muriuki Muriithi
2022-12-21
auth: oauth2: users: Add expected property
Frederick Muriuki Muriithi
2022-12-21
migrations: create the authorisation_code table
Frederick Muriuki Muriithi
2022-12-21
migrations: create oauth2_tokens table
Frederick Muriuki Muriithi
2022-12-21
migrations: New migration
Frederick Muriuki Muriithi
2022-12-21
auth: Add default row_factory to sqlite3
Frederick Muriuki Muriithi
2022-12-21
Enable authentication
Frederick Muriuki Muriithi
2022-12-21
gn3: (gn3.random -> gn3.chancy): Rename module to avoid conflicts.
Frederick Muriuki Muriithi
2022-12-12
auth: functions to get user resources
Frederick Muriuki Muriithi
2022-12-12
tests: Update fixtures to use for testing resources functions
Frederick Muriuki Muriithi
2022-12-12
auth: Add a way to check whether a user is a group leader
Frederick Muriuki Muriithi
2022-12-12
auth: pass cursor object to `user_group` function
Frederick Muriuki Muriithi
2022-12-12
auth: Attach group to GroupRole, rather than group_id
Frederick Muriuki Muriithi
2022-12-12
tests: Reorganise fixtures
Frederick Muriuki Muriithi
2022-12-08
Remove unused import
Frederick Muriuki Muriithi
2022-12-08
auth: test for `user_resources` function (incomplete)
Frederick Muriuki Muriithi
2022-12-08
tests: Fix issues caught by tests
Frederick Muriuki Muriithi
2022-12-08
auth: add test to retrieve public resources
Frederick Muriuki Muriithi
2022-12-08
auth: add function to retrieve a user's group
Frederick Muriuki Muriithi
2022-12-08
migrations: Add column `public` to `resources` table
Frederick Muriuki Muriithi
2022-12-06
Use a dataset's name to fetch it's metadata from RDF
Munyoki Kilyungi
2022-12-06
migrations: Add `group_user_roles_on_resources` table
Frederick Muriuki Muriithi
2022-12-06
mypy and pylint fixes
Alexander_Kabui
2022-12-06
remove noisy tests for constant array correlation
Alexander_Kabui
2022-12-06
update tests for lit correlation
Alexander_Kabui
2022-12-02
correlations: return `None` rather than zero for missing lit corrs
Frederick Muriuki Muriithi
2022-11-29
remove trailing whitespace
AlexanderKabui
2022-11-29
remove unused function parameter
AlexanderKabui
2022-11-29
tests: fix failing test
Frederick Muriuki Muriithi
2022-11-28
Catch a URLError when virtuoso isn't running at all
Munyoki Kilyungi
2022-11-28
Fix pylint errors
Munyoki Kilyungi
2022-11-28
Fail gracefully when virtuoso is not accessible
Munyoki Kilyungi
2022-11-24
auth: Check for authentication and fix errors
Frederick Muriuki Muriithi
2022-11-24
auth: Implement `create_resource` function
Frederick Muriuki Muriithi
2022-11-24
auth: Define base exceptions
Frederick Muriuki Muriithi
2022-11-24
tests: Add test for `create_resource`
Frederick Muriuki Muriithi
2022-11-23
Create a new REST endpoint for fetching a phenotype's metadata
Munyoki Kilyungi
2022-11-21
auth: Prevent group leader from being a member of multiple groups
Frederick Muriuki Muriithi
2022-11-17
auth: Finish implementation of `create_group_role`
Frederick Muriuki Muriithi
2022-11-17
Migrations: Create `group_users` table
Frederick Muriuki Muriithi
2022-11-17
tests: Add test to check creation of roles attached to groups
Frederick Muriuki Muriithi
2022-11-17
auth: Define the `User` type
Frederick Muriuki Muriithi
2022-11-17
Tests: Make test failure messages clearer.
Frederick Muriuki Muriithi
2022-11-17
Migrations: Add column `group_role_id` to `group_roles` table
Frederick Muriuki Muriithi
2022-11-17
tests: test for addition of data to non-empty table
Frederick Muriuki Muriithi
2022-11-16
pylint: fix some linting errors
Frederick Muriuki Muriithi
2022-11-16
tests: Add tests for privileges
Frederick Muriuki Muriithi
2022-11-16
auth: fix bugs in the code
Frederick Muriuki Muriithi
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