index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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2024-08-26
Fix handling of sparql errors.
Munyoki Kilyungi
2024-08-26
If there's no data, return a 404.
Munyoki Kilyungi
2024-08-26
Set correct content-header & status code for ld+json/json response.
Munyoki Kilyungi
2024-08-26
Replace map with list comprehension.
Munyoki Kilyungi
2024-08-26
Fetch all the wiki entries by symbol.
Munyoki Kilyungi
2024-08-26
Move constants to their own file.
Munyoki Kilyungi
2024-08-26
Run autopep8 against file.
Munyoki Kilyungi
2024-08-26
chore: fix pylint errors
John Nduli
2024-08-26
refactor: split out utlities into their modules and change api to use metadata
John Nduli
2024-08-26
refactor: clean up wiki edit implementation
John Nduli
2024-08-26
feat: add support for categories in edit query and clearer errors
John Nduli
2024-08-26
feat: support for edit wiki entry
John Nduli
2024-08-13
Fix pylint errors.
Munyoki Kilyungi
2024-08-09
Use correct stemming strategy when searching.
Munyoki Kilyungi
2024-08-09
Add RIF/WIKI as search prefixes for XRF/XWK.
Munyoki Kilyungi
2024-08-01
Add logging for helping with troubleshooting.
Frederick Muriuki Muriithi
2024-08-01
Add handler for unhandled exceptions from `gn3.oauth2` module.
Frederick Muriuki Muriithi
2024-08-01
Update case-attribute editing to use new authorisation.
Frederick Muriuki Muriithi
2024-08-01
Add `gn3.oauth2` module to handle authorisations
Frederick Muriuki Muriithi
2024-08-01
Stem group field regardless of case.
Arun Isaac
2024-08-01
Stem all the time.
Arun Isaac
2024-07-23
chore: add logging info
John Nduli
2024-07-23
chore: mypy and pylint fixes
John Nduli
2024-07-23
fix: resolve duplicate errors when updating data
John Nduli
2024-07-23
refactor: clean query for insert
John Nduli
2024-07-23
refactor: clean up insert query
John Nduli
2024-07-23
refactor: reorganize update_rif script to be more pythonic
John Nduli
2024-07-23
chore: fix pylint errors
John Nduli
2024-07-23
refactor: rename addRIf to update_rif_table.py
John Nduli
2024-07-12
Rename hash_rdf_graph -> md5hash_ttl_dir.
Munyoki Kilyungi
2024-07-12
Use correct ttl-dir path when generating checksums.
Munyoki Kilyungi
2024-07-12
fix: remove .py extension for addRif to prevent pylint checks
John Nduli
2024-07-12
refactor: fix mypy and pylint errors
John Nduli
2024-07-12
feat: copy addRif script from genenetwork1
John Nduli
2024-07-08
Pass output directory to R/qtl script instead of pulling it from the
zsloan
2024-07-05
fix: return query error message from xapian
John Nduli
2024-07-03
Return a "-1" if the turtle directory does not exist.
Munyoki Kilyungi
2024-07-03
Generate a checksum for all the ttl files.
Munyoki Kilyungi
2024-07-03
Add type-hints to hash_generif_graph.
Munyoki Kilyungi
2024-07-03
Refactor how the generif md5 sum is calculated and stored in XAPIAN.
Munyoki Kilyungi
2024-07-03
Use correct cache for RIF/Wiki entries.
Munyoki Kilyungi
2024-07-03
feat: drop intermediate folders when running parallel xapian compact
John Nduli
2024-07-03
feat: add support for parallel xapian compact
John Nduli
2024-07-03
feat: index rif and wiki without positions
John Nduli
2024-07-03
feat: drop common words when building rdf caches
John Nduli
2024-07-03
feat: set 67 parallel processes to run in prod
John Nduli
2024-07-03
fix: remove namespaces since child processes copy the rdf caches
John Nduli
2024-07-03
fix: use correct prefix and index key; group wiki cache query
John Nduli
2024-07-03
feat: add wikidata prefix to search api
John Nduli
2024-07-03
feat: add wikidata indexing
John Nduli
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