aboutsummaryrefslogtreecommitdiff
AgeCommit message (Expand)Author
2021-05-08setup.py: Create basic setup fileBonfaceKilz
2021-05-08Fix typoBonfaceKilz
2021-05-08tests: test_species: New testsBonfaceKilz
2021-05-08db: species: Fetch chromosomes using a group or species nameBonfaceKilz
2021-05-08gn3: db_utils: Remove mypy ignore stubBonfaceKilz
2021-05-08Ignore missing stub imports from MySQLdbBonfaceKilz
2021-05-08Fix pep-8 errorsBonfaceKilz
2021-05-08db: traits: Add extra method for looking up webqtl datasetsBonfaceKilz
2021-05-08db: traits: Update method for inserting publication methodBonfaceKilz
2021-05-08Add method for inserting publication_dataBonfaceKilz
2021-05-08Add webqtlCaseData DS to keep track of case data in one traitBonfaceKilz
2021-05-08Replace namedtuple with a dataclassBonfaceKilz
2021-05-08Add method for inserting phenotypesBonfaceKilz
2021-05-08Add method for inserting publicationsBonfaceKilz
2021-05-08Add method to fetch riset name and idBonfaceKilz
2021-05-08Add endpoints for (batch) entering phenotypes and genotypesBonfaceKilz
2021-05-08Add issue and PR templatesBonfaceKilz
2021-05-08Add extra procedure for parsing a genotype fileBonfaceKilz
2021-05-08Add extra genotype test fileBonfaceKilz
2021-05-08Add python-mysqlclient as a dependencyBonfaceKilz
2021-05-05Merge pull request #9 from genenetwork/Feature/speed-up-correlationBonfaceKilz
2021-05-03add default no of coresAlexander Kabui
2021-05-03modify default SQL_URIAlexander Kabui
2021-05-03add trait_id fix mypy issuesAlexander Kabui
2021-05-03minor fixes for tiss correlation tests and namingAlexander Kabui
2021-05-03replace database with connAlexander Kabui
2021-05-02remove trait and dataset blueprintAlexander Kabui
2021-05-02delete dataset and trait filesAlexander Kabui
2021-04-20pep8 formattingAlexander Kabui
2021-04-20add experiment function for computing tissue correlation using multiprocessingAlexander Kabui
2021-04-18refactor:return trait_name in corr_resultsAlexander Kabui
2021-04-17ad pep8 formattingAlexander Kabui
2021-04-17refactor tests for litAlexander Kabui
2021-04-17add sort for correlation resultsAlexander Kabui
2021-04-16add benchmark function for sample rAlexander Kabui
2021-04-16benchmark normal function for sample rAlexander Kabui
2021-04-15optimization for sample correlationAlexander Kabui
2021-04-15test endpoint for fetching probeset data typesAlexander Kabui
2021-04-12replace experimental dbAlexander Kabui
2021-04-12fix tests for lit correlationAlexander Kabui
2021-04-12fix merge conflictAlexander Kabui
2021-04-12Integrate correlation APIAlexander Kabui
2021-04-06add mock db for testsAlexander Kabui
2021-04-06fix DocstringsAlexander Kabui
2021-04-06delete unnecessary functions and commentsAlexander Kabui
2021-04-05fix for fetching dataset traits dataAlexander Kabui
2021-04-04refactor code for trait dataAlexander Kabui
2021-04-04fix:db connectionAlexander Kabui
2021-04-03add tests for getting trait dataAlexander Kabui
2021-04-01add mysqclient to requirements fileAlexander Kabui
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-24 15:53:54 +0000