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AgeCommit message (Expand)Author
2022-03-12Move operations on sample_data to it's own moduleBonfaceKilz
2022-03-12Don't add extra key "Column" to dict if there are no changesBonfaceKilz
2022-03-12Test edges cases for csv files when running csvdiffBonfaceKilz
2022-03-12Fill CSV text if there are non-even rowsBonfaceKilz
2022-03-12Create new method for filling csv with a default valueBonfaceKilz
2022-03-12Replace "all" with "and"BonfaceKilz
2022-03-12Store columns in the output dictBonfaceKilz
2022-03-12Add methods for working with csv dataBonfaceKilz
2022-03-12db: Fix error in SQL queryBonfaceKilz
2022-03-12Fix pylint errorBonfaceKilz
2022-03-12Append case attributes to csv data if they existBonfaceKilz
2022-03-12db: Extend csv query to fetch case attributesBonfaceKilz
2022-03-12Revert "db: Fetch correct sample data"BonfaceKilz
2022-03-11Fix typing errorsFrederick Muriuki Muriithi
2022-03-11Fix some linting issuesFrederick Muriuki Muriithi
2022-03-08Remove unused function and its testsFrederick Muriuki Muriithi
2022-03-08Fix tests, and issues caught by testsFrederick Muriuki Muriithi
2022-03-08Create database connections within context managersFrederick Muriuki Muriithi
2022-03-04Automatically decode Redis stringsFrederick Muriuki Muriithi
2022-03-04Document basic partial correlations dependenciesFrederick Muriuki Muriithi
2022-03-03Add endpoint for checking state of external processesFrederick Muriuki Muriithi
2022-03-03Do incremental backoff if there are no jobs on the queueFrederick Muriuki Muriithi
2022-03-03Run partial correlations in an external processFrederick Muriuki Muriithi
2022-02-25Fix issue where 0's were treated as False for the primary trait inzsloan
2022-02-24gn3: computations: Call Popen with context manager.Arun Isaac
2022-02-24gn3: Explicitly specify UTF-8 to be the file encoding.Arun Isaac
2022-02-21Fix minor issues introduced while fixing linting errorsFrederick Muriuki Muriithi
2022-02-21Fix a myriad of linter issuesFrederick Muriuki Muriithi
2022-02-21Add test to ensure samples are read correctly from .geno filesFrederick Muriuki Muriithi
2022-02-21Test partial corrs API with mix of existing and non-existing control traitsFrederick Muriuki Muriithi
2022-02-19Test partial corrs endpoint with non-existing control traitsFrederick Muriuki Muriithi
2022-02-18Remove erroneous test based on wrong assumptionsFrederick Muriuki Muriithi
2022-02-18Remove code trying to query non-existent `TempFreeze` tableFrederick Muriuki Muriithi
2022-02-18Test partial correlations endpoint with non-existent primary traitsFrederick Muriuki Muriithi
2022-02-17Test partial correlations endpoint with missing data in POST requestFrederick Muriuki Muriithi
2022-02-17Create client fixture for integration testsFrederick Muriuki Muriithi
2022-02-17Use pytest's "mark" feature to categorise testsFrederick Muriuki Muriithi
2022-02-17Add property tests for `dictify_by_samples`Frederick Muriuki Muriithi
2022-02-12Provide custom class to run testsFrederick Muriuki Muriithi
2022-02-11sql: Remove database mapping code.Arun Isaac
2022-02-11Add scaffolding to run different types of testsFrederick Muriuki Muriithi
2022-02-11Quote shell variables to prevent globbingFrederick Muriuki Muriithi
2022-02-09github: Remove GitHub actions.Arun Isaac
2022-02-09Remove obsolete `PublishFreeze` tableFrederick Muriuki Muriithi
2022-02-08Merge iterations to remove unnecessary computationsFrederick Muriuki Muriithi
2022-02-08Remove multiprocessing for stabilityFrederick Muriuki Muriithi
2022-02-08Give sorting functions more descriptive namesFrederick Muriuki Muriithi
2022-02-08Use multiprocessing to speed up computationFrederick Muriuki Muriithi
2022-02-08Remove unnecessary computationFrederick Muriuki Muriithi
2022-02-08db: traits: Enable deletion of individual sample valuesBonfaceKilz
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