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AgeCommit message (Expand)Author
2021-09-16add function to compose and run wgcna scriptAlexander Kabui
2021-09-16function to parse form data and write to json fileAlexander Kabui
2021-09-15initial test file for wgcnaAlexander Kabui
2021-09-15init wgcna file to run r script and preprocess dataAlexander Kabui
2021-09-15remove golang package causing build failureAlexander Kabui
2021-09-15Update entry-point function for heatmap generationFrederick Muriuki Muriithi
2021-09-15Generate heatmaps in a single plotFrederick Muriuki Muriithi
2021-09-15Process data into format usable by heatmapsFrederick Muriuki Muriithi
2021-09-15Integrate get_lsr_from_chr functionFrederick Muriuki Muriithi
2021-09-15Reorganise modulesFrederick Muriuki Muriithi
2021-09-15Fix format of arguments and expected valuesFrederick Muriuki Muriithi
2021-09-15Add missing sample file for testsFrederick Muriuki Muriithi
2021-09-15minor fixesAlexander Kabui
2021-09-15rename variables && delete debugsAlexander Kabui
2021-09-15Fetch IMAGE_DIR env and add img locationAlexander Kabui
2021-09-14remove debug statementsAlexander Kabui
2021-09-14function to generate rand str for imageAlexander Kabui
2021-09-14plot plotDendroAndColors and generate pngAlexander Kabui
2021-09-14construct gene co-expression network & module detectionAlexander Kabui
2021-09-14compute the softthreshholdAlexander Kabui
2021-09-14Checking data for excessive missing valuesAlexander Kabui
2021-09-14load the required data for analysisAlexander Kabui
2021-09-14init commit for wgcna scriptAlexander Kabui
2021-09-09Update proof-of-concept codeMuriithi Frederick Muriuki
2021-09-08Ease search for traits and chromosomesMuriithi Frederick Muriuki
2021-09-08Parse Chr value as int where possibleMuriithi Frederick Muriuki
2021-09-08Remove extraneous text to ease sortingMuriithi Frederick Muriuki
2021-09-08Fix the traits order computations for clusteringMuriithi Frederick Muriuki
2021-09-06Provide function to organise parsed QTLReaper resultsMuriithi Frederick Muriuki
2021-09-06Leave "Chr" value as string when parsingMuriithi Frederick Muriuki
2021-09-06Handle type-coercion exceptionsMuriithi Frederick Muriuki
2021-09-06Find nearest markerMuriithi Frederick Muriuki
2021-09-03Add covarstruct as a possible keyword for the rqtl_wrapper.R script (not inte...zsloan
2021-09-01Fix linting and typing issuesMuriithi Frederick Muriuki
2021-09-01Built top-level genotype file parsing functionMuriithi Frederick Muriuki
2021-09-01Parse data lines into markersMuriithi Frederick Muriuki
2021-09-01Parse the genotype file's data headerMuriithi Frederick Muriuki
2021-09-01Implement parsing of genotype labelsMuriithi Frederick Muriuki
2021-08-31Fix linting errors, minor bugs and reorganise codeMuriithi Frederick Muriuki
2021-08-31Update `heatmap_data` function: remove extraneous dataMuriithi Frederick Muriuki
2021-08-31Fix testMuriithi Frederick Muriuki
2021-08-31Parse QTLReaper outputsMuriithi Frederick Muriuki
2021-08-31Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_gener...Muriithi Frederick Muriuki
2021-08-31Fix bugs with `run_reaper` functionMuriithi Frederick Muriuki
2021-08-31Provide utilities for genotype filesMuriithi Frederick Muriuki
2021-08-30Update documentation on genotype filesMuriithi Frederick Muriuki
2021-08-30Fix issues with traits file formatMuriithi Frederick Muriuki
2021-08-30Remove empty lineMuriithi Frederick Muriuki
2021-08-30Fix some linting errors and minor bugs.Muriithi Frederick Muriuki
2021-08-30Implement module for interfacing with rust-qtlreaperMuriithi Frederick Muriuki
generated by cgit v1.2.3 (git 2.44.0) at 2024-12-12 03:48:57 +0000