genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-06-18	gn3: db: Add new function for doing sql INSERT	BonfaceKilz
2021-06-18	sql: Add a new folder that houses sql statements for new tables	BonfaceKilz
2021-06-18	Add data structures for the table metadata_audit	BonfaceKilz
2021-06-18	gn3: db: Add spacing before around "AND" in sql clause	BonfaceKilz
2021-06-18	unit: test_phenotypes: Test for multiple "WHERE" clauses	BonfaceKilz
2021-06-18	Get the diff between 2 dicts and return that as a dict	BonfaceKilz
2021-06-18	gn3: db: Return None if data and where are empty	BonfaceKilz
2021-06-18	fix index error (#16)	Alexander Kabui
2021-06-18	Move the methods, "update" and "fetch", to gn3.db	BonfaceKilz
2021-06-18	db: phenotypes: Fix publication_mapping	BonfaceKilz
2021-06-18	db: phenotypes: Fix typo	BonfaceKilz
2021-06-18	tests: test_phenotype: Add function that tests "fetchone"	BonfaceKilz
2021-06-18	db: phenotypes: Add function for fetching a single result...* gn3/db/phenotypes.py (fetchone): New function.	BonfaceKilz
2021-06-18	db: phenotypes: Add a dataclass map...Maps a string to it's dataclass.	BonfaceKilz
2021-06-18	db: phenotypes: Add Publication table mapping	BonfaceKilz
2021-06-18	db: phenotypes: Rename phenotype_column_mapping	BonfaceKilz
2021-06-18	db: phenotypes: Add Publication dataclass and mapping	BonfaceKilz
2021-06-18	db: phenotypes: Update failing tests	BonfaceKilz
2021-06-18	db: phenotypes: Generalise the update function...* gn3/db/phenotypes.py (update_phenotype): Delete it. (update): New, more general function.	BonfaceKilz
2021-06-18	db: phenotypes: Map a table to it's relevant dict mapping	BonfaceKilz
2021-06-18	db: phenotypes: Add type for Dataclass...See: https://www.py4u.net/discuss/188952	BonfaceKilz
2021-06-18	db: phenotypes: Put mapping def after dataclass	BonfaceKilz
2021-06-18	db: phenotypes: Add phenotype table mapping	BonfaceKilz
2021-06-18	db: phenotypes: Add dataclass to represent PublishXRef	BonfaceKilz
2021-06-18	db: phenotype: Make "pylint: disable=[R0902]" global for file	BonfaceKilz
2021-06-18	tests: test_phenotypes: New test cases for loading phenotypes	BonfaceKilz
2021-06-18	db: phenotypes: Add a way of updating the Phenotype table...* gn3/db/phenotypes.py (Phenotype): New dataclass. (update_phenotype): New function. [phenotype_column_mapping]: New variable.	BonfaceKilz
2021-06-18	Fixed issue where all bool kwargs were always being passed to generate_rqtl_c...	zsloan
2021-06-18	Added option for enabling permutation strata...Fixed issue where covariates with numerical names were being ignored Fixed issue where the hash filename wasn't being used for the permutation output	zsloan
2021-06-18	Add rqtl_wrapper.R script and necessary imports to guix.scm	zsloan
2021-06-18	Fix R/qtl command and the way keyword arguments are passed	zsloan
2021-06-16	Merge branch 'main' of https://github.com/genenetwork/genenetwork3 into main	zsloan
2021-06-16	Fixed spelling of coeffient to coefficient	zsloan
2021-06-16	add r-wgna package	Alexander Kabui
2021-06-16	minor fix	Alexander Kabui
2021-06-16	refactor script and add tests	Alexander Kabui
2021-06-16	add r_testthatpackage	Alexander Kabui
2021-06-16	add fetch args function	Alexander Kabui
2021-06-15	fix script path issues	Alexander Kabui
2021-06-14	fix missing call to bicorAndPvalue	Alexander Kabui
2021-06-14	add biweight r script and tests	Alexander Kabui
2021-06-11	minor fixes	Alexander Kabui
2021-06-11	remove ununsed variables	Alexander Kabui
2021-06-11	refactor perf query functions	Alexander Kabui
2021-06-11	rename perf query file	Alexander Kabui
2021-06-11	pep8 formatting	Alexander Kabui
2021-06-11	add tests to setup packages	Alexander Kabui
2021-06-11	add types and dataset names	Alexander Kabui
2021-06-11	initial commit for queries perfomance tests	Alexander Kabui
2021-06-07	db: test_db: Add extra variable in test data for "id"	BonfaceKilz