genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-10-19	Add typing. Simplify arguments.	Frederick Muriuki Muriithi
2021-10-19	Remove file I/O statements	Frederick Muriuki Muriithi
2021-10-19	Implement `dictify_by_samples`	Frederick Muriuki Muriithi
2021-10-18	Disable pylint issue	Frederick Muriuki Muriithi
2021-10-18	Implement `control_samples` function as is in GN1	Frederick Muriuki Muriithi
2021-10-18	Move `export_informative` function to `gn3.db.traits` module	Frederick Muriuki Muriithi
2021-10-18	Move 'export_trait_data' to 'gn3.db.traits' module	Frederick Muriuki Muriithi
2021-10-18	Migrate `export_informative` function	Frederick Muriuki Muriithi
2021-10-14	Fixed when model is set to account for situations with no covariates	zsloan
2021-10-14	Incorporated Danny's code for calculating QTL main effects into rqtl_wrapper.R	zsloan
2021-10-12	Merge pull request #40 from zsloan/bug/fix_rqtl_covariates	zsloan
2021-10-12	Merge branch 'main' of https://github.com/genenetwork/genenetwork3 into bug/f...	zsloan
2021-10-06	guix.scm: Add python-flask-cors and python-plotly dependencies	BonfaceKilz
2021-09-28	Provide loci names to heatmap	Frederick Muriuki Muriithi
2021-09-28	Retrieve loci names ordered by chromosomes	Frederick Muriuki Muriithi
2021-09-28	Approximate single-spectrum colour scale in GN1	Frederick Muriuki Muriithi
2021-09-28	Merge pull request #38 from genenetwork/feature/wgcna_analysis	BonfaceKilz
2021-09-27	modify unittests	Alexander Kabui
2021-09-27	modify integration tests	Alexander Kabui
2021-09-27	add file not found exception	Alexander Kabui
2021-09-27	add tests for calling wgcna_script	Alexander Kabui
2021-09-27	return str error for exception	Alexander Kabui
2021-09-27	fix merge conflicts	Alexander Kabui
2021-09-27	remove unnecessary comments and variables	Alexander Kabui
2021-09-27	Merge pull request #37 from genenetwork/heatmap_generation	BonfaceKilz
2021-09-27	Remove unnecessary variable.	Frederick Muriuki Muriithi
2021-09-27	Narrow the exception and add comments	Frederick Muriuki Muriithi
2021-09-27	Update terminology: `riset` to `group`	Frederick Muriuki Muriithi
2021-09-27	Update terminology: `strain` to `sample`	Frederick Muriuki Muriithi
2021-09-25	minor fixes for unittests	Alexander Kabui
2021-09-23	Fix covariates as described by Danny	zsloan
2021-09-23	add traits as columns names and pass as json input	Alexander Kabui
2021-09-23	minor fixes for endpoint	Alexander Kabui
2021-09-23	Return r error if returncode!=0	Alexander Kabui
2021-09-23	read generated files from r and return output	Alexander Kabui
2021-09-23	check for na powerEst and use a default value	Alexander Kabui
2021-09-23	append input to output	Alexander Kabui
2021-09-23	sample output data	Alexander Kabui
2021-09-23	validate required output	Alexander Kabui
2021-09-23	add mock test data for script	Alexander Kabui
2021-09-23	pass json file path as an arg	Alexander Kabui
2021-09-23	pass other variables from user input for network constr	Alexander Kabui
2021-09-23	add rjson dependency	Alexander Kabui
2021-09-23	load data from json file and and convert to dt	Alexander Kabui
2021-09-23	Add missing dependencies causing pylint to fail	Frederick Muriuki Muriithi
2021-09-23	Refactor: Move common sample data to separate file	Frederick Muriuki Muriithi
2021-09-22	Fix more pylint errors	Frederick Muriuki Muriithi
2021-09-22	Fix typing issues	Frederick Muriuki Muriithi
2021-09-22	Fix pylint errors	Frederick Muriuki Muriithi
2021-09-22	Update check: Heatmaps need at least 2 items	Frederick Muriuki Muriithi