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2021-08-16Merge pull request #32 from genenetwork/heatmap_decompose_db_retrievalBonfaceKilz
2021-08-12Fix linting errorsMuriithi Frederick Muriuki
2021-08-12Import missing definitionsMuriithi Frederick Muriuki
2021-08-11use normal function for correlation (#34)Alexander Kabui
2021-08-09Build up the heatmap dataMuriithi Frederick Muriuki
2021-08-09Set up the trait dataset type correctlyMuriithi Frederick Muriuki
2021-08-09Retrieve the trait dataMuriithi Frederick Muriuki
2021-08-09Add missing arguments. Fix typo.Muriithi Frederick Muriuki
2021-08-09Fix linting errorsMuriithi Frederick Muriuki
2021-08-08Update testsMuriithi Frederick Muriuki
2021-08-08Only load extra data if the traits have basic infoMuriithi Frederick Muriuki
2021-08-08Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...Muriithi Frederick Muriuki
2021-08-07Add gunicorn support for productionPjotr Prins
2021-08-07Update info on running guix containerPjotr Prins
2021-08-05db: traits: Return unique values when fetching sample dataBonfaceKilz
2021-08-05Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...Muriithi Frederick Muriuki
2021-08-05Reorganise the database codeMuriithi Frederick Muriuki
2021-08-05Build up trait_name items from full nameMuriithi Frederick Muriuki
2021-08-04Fix issues caught by pylintMuriithi Frederick Muriuki
2021-08-04Retrieve the RISet and RISet ID valuesMuriithi Frederick Muriuki
2021-08-04Add tests for post-processing functionsMuriithi Frederick Muriuki
2021-08-04sql: Add documentation extracted from within the database.Arun Isaac
2021-08-04Update testsMuriithi Frederick Muriuki
2021-08-04Avoid string interpolation: use prepared statementMuriithi Frederick Muriuki
2021-08-04Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...Muriithi Frederick Muriuki
2021-08-03guix.scm: Add csvdiff as a propagated inputBonfaceKilz
2021-08-02sql: Document the table Strain.Arun Isaac
2021-07-31sql: Add schema description.Arun Isaac
2021-07-30Rework db functions to enable postprocessingMuriithi Frederick Muriuki
2021-07-30Remove extra spaceMuriithi Frederick Muriuki
2021-07-30Add module for common utilitiesMuriithi Frederick Muriuki
2021-07-30Return dict from query functionsMuriithi Frederick Muriuki
2021-07-30Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...Muriithi Frederick Muriuki
2021-07-29Merge pull request #30 from genenetwork/Feature/Update-db-from-csv-dataBonfaceKilz
2021-07-29Merge branch 'main' into Feature/Update-db-from-csv-dataBonfaceKilz
2021-07-29Delete "update_raw" and it's test-casesBonfaceKilz
2021-07-29Add method for updating values from a sample datasetBonfaceKilz
2021-07-29Add partial type annotations for slink moduleMuriithi Frederick Muriuki
2021-07-29Add type annotations to the functionMuriithi Frederick Muriuki
2021-07-29Retrieve trait informationMuriithi Frederick Muriuki
2021-07-29Make name retrieval more generalMuriithi Frederick Muriuki
2021-07-29Retrieve 'ProbeSet' trait nameMuriithi Frederick Muriuki
2021-07-29Add partial type annotations for slink moduleMuriithi Frederick Muriuki
2021-07-29Add type annotations to the functionMuriithi Frederick Muriuki
2021-07-29db: traits: Remove publishdata columnBonfaceKilz
2021-07-28Retrieve trait informationMuriithi Frederick Muriuki
2021-07-28Make name retrieval more generalMuriithi Frederick Muriuki
2021-07-28Retrieve 'ProbeSet' trait nameMuriithi Frederick Muriuki
2021-07-26tests: test_db: Add test case for "update_raw"BonfaceKilz
2021-07-26gn3: db: Create a raw update queryBonfaceKilz
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