genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-06-18	add ignore_missing_imports for numpy in mypy.ini since it complains about tha...	zsloan
2021-06-18	Resolve mypy errors in computations/rqtl.py	zsloan
2021-06-18	Fixed spelling of coeffient to coefficient	zsloan
2021-06-18	minor fixes	Alexander Kabui
2021-06-18	remove ununsed variables	Alexander Kabui
2021-06-18	refactor perf query functions	Alexander Kabui
2021-06-18	rename perf query file	Alexander Kabui
2021-06-18	pep8 formatting	Alexander Kabui
2021-06-18	add tests to setup packages	Alexander Kabui
2021-06-18	add types and dataset names	Alexander Kabui
2021-06-18	initial commit for queries perfomance tests	Alexander Kabui
2021-06-18	db: test_db: Add extra variable in test data for "id"	BonfaceKilz
2021-06-18	Rename json_data column to json_diff_data	BonfaceKilz
2021-06-18	gn3: db: Fix how columns from tables is resolved	BonfaceKilz
2021-06-18	gn3: db: Add "id_" property to metadata_audit class and mapping	BonfaceKilz
2021-06-18	tests: test_db: Add a test-case for fetchall	BonfaceKilz
2021-06-18	gn3: db: Add "fetchall" method.	BonfaceKilz
2021-06-18	gn3: metadata_audit: Make props for MetadataAudit class optional	BonfaceKilz
2021-06-18	gn3: db: Make "WHERE" clause optional	BonfaceKilz
2021-06-18	gn3: db: Use correct DATACLASSMAP entry from metadata_audit	BonfaceKilz
2021-06-18	tests: test_db: Rename TestPhenotype	BonfaceKilz
2021-06-18	tests: test_phenotype: Rename to test_db	BonfaceKilz
2021-06-18	gn3: db: sort imports	BonfaceKilz
2021-06-18	gn3: db: Remove "escape_string" from imports	BonfaceKilz
2021-06-18	Use prepared statements for FETCH sql function	BonfaceKilz
2021-06-18	gn3: db: Replace items() with keys()	BonfaceKilz
2021-06-18	Use prepared statements for UPDATE sql function	BonfaceKilz
2021-06-18	tests: test_audit: Update test case to check for prepared statements	BonfaceKilz
2021-06-18	gn3: db: Add new function for doing sql INSERT	BonfaceKilz
2021-06-18	sql: Add a new folder that houses sql statements for new tables	BonfaceKilz
2021-06-18	Add data structures for the table metadata_audit	BonfaceKilz
2021-06-18	gn3: db: Add spacing before around "AND" in sql clause	BonfaceKilz
2021-06-18	unit: test_phenotypes: Test for multiple "WHERE" clauses	BonfaceKilz
2021-06-18	Get the diff between 2 dicts and return that as a dict	BonfaceKilz
2021-06-18	gn3: db: Return None if data and where are empty	BonfaceKilz
2021-06-18	fix index error (#16)	Alexander Kabui
2021-06-18	Move the methods, "update" and "fetch", to gn3.db	BonfaceKilz
2021-06-18	db: phenotypes: Fix publication_mapping	BonfaceKilz
2021-06-18	db: phenotypes: Fix typo	BonfaceKilz
2021-06-18	tests: test_phenotype: Add function that tests "fetchone"	BonfaceKilz
2021-06-18	db: phenotypes: Add function for fetching a single result	BonfaceKilz
2021-06-18	db: phenotypes: Add a dataclass map	BonfaceKilz
2021-06-18	db: phenotypes: Add Publication table mapping	BonfaceKilz
2021-06-18	db: phenotypes: Rename phenotype_column_mapping	BonfaceKilz
2021-06-18	db: phenotypes: Add Publication dataclass and mapping	BonfaceKilz
2021-06-18	db: phenotypes: Update failing tests	BonfaceKilz
2021-06-18	db: phenotypes: Generalise the update function	BonfaceKilz
2021-06-18	db: phenotypes: Map a table to it's relevant dict mapping	BonfaceKilz
2021-06-18	db: phenotypes: Add type for Dataclass	BonfaceKilz
2021-06-18	db: phenotypes: Put mapping def after dataclass	BonfaceKilz