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2021-07-20Implement the correlation functionMuriithi Frederick Muriuki
2021-07-20Add test for code to move over from GN1Muriithi Frederick Muriuki
2021-07-10gn3: db: Use correct type for columns arg in fetch functionsBonfaceKilz
2021-07-10Fix pylint issuesBonfaceKilz
2021-07-10db: test_db: Test that a fetch is correct when columns are specifiedBonfaceKilz
2021-07-10gn3: db: Add extra argument to specify column in fetch statementsBonfaceKilz
2021-07-10db: phenotypes: Add Probeset data structuresBonfaceKilz
2021-06-29Replace list with a tuple as an argument when setting success_codesBonfaceKilz
2021-06-29guix: Add diffutils as a propagated inputBonfaceKilz
2021-06-29guix: Remove commented out hunkBonfaceKilz
2021-06-29gn3: diff: Set success_codes when running the diff toolBonfaceKilz
2021-06-29gn3: commands: Add extra arg that sets the success codes to checkBonfaceKilz
2021-06-29tests: test_commands: Add extra check for when an error occursBonfaceKilz
2021-06-29Add a diffing functionBonfaceKilz
2021-06-29tests: test_data: Add test data that contains trait data for 10007BonfaceKilz
2021-06-25Check for the correct result codeBonfaceKilz
2021-06-23Merge pull request #21 from genenetwork/fix/biweight-errorsBonfaceKilz
2021-06-23fix pylint issuesAlexander Kabui
2021-06-23minor fixes for biweight scriptAlexander Kabui
2021-06-22scripts: laminar: Add json with hooks for running a linterBonfaceKilz
2021-06-22scripts: laminar: Add sh scripts for CIBonfaceKilz
2021-06-21Merge pull request #20 from genenetwork/feature/biweight-correlationBonfaceKilz
2021-06-20minor fix docstringAlexander Kabui
2021-06-20merge mainAlexander Kabui
2021-06-20fix conflictAlexander Kabui
2021-06-20make requested changes to biweightAlexander Kabui
2021-06-18Merge pull request #13 from zsloan/feature/add_rqtl_endpointszsloan
2021-06-18Fixed another error where test_generate_rqtl_command didn't include the filen...zsloan
2021-06-18Fixed file type from json to csv for test_generate_rqtl_commandzsloan
2021-06-18Fixed test_rqtl.py to include Rscript in the commandzsloan
2021-06-18Fixed test_compose_rqtl_command test; forgot to include Rscript in the commandzsloan
2021-06-18Change test_compose_rqtl_command in test_commands.py to have different argume...zsloan
2021-06-18Fixed pylint issueszsloan
2021-06-18add ignore_missing_imports for numpy in mypy.ini since it complains about tha...zsloan
2021-06-18Resolve mypy errors in computations/rqtl.pyzsloan
2021-06-18Fixed spelling of coeffient to coefficientzsloan
2021-06-18minor fixesAlexander Kabui
2021-06-18remove ununsed variablesAlexander Kabui
2021-06-18refactor perf query functionsAlexander Kabui
2021-06-18rename perf query fileAlexander Kabui
2021-06-18pep8 formattingAlexander Kabui
2021-06-18add tests to setup packagesAlexander Kabui
2021-06-18add types and dataset namesAlexander Kabui
2021-06-18initial commit for queries perfomance testsAlexander Kabui
2021-06-18db: test_db: Add extra variable in test data for "id"BonfaceKilz
2021-06-18Rename json_data column to json_diff_dataBonfaceKilz
2021-06-18gn3: db: Fix how columns from tables is resolvedBonfaceKilz
2021-06-18gn3: db: Add "id_" property to metadata_audit class and mappingBonfaceKilz
2021-06-18tests: test_db: Add a test-case for fetchallBonfaceKilz
2021-06-18gn3: db: Add "fetchall" method.BonfaceKilz
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