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AgeCommit message (Expand)Author
2021-09-15Fetch IMAGE_DIR env and add img locationAlexander Kabui
2021-09-14remove debug statementsAlexander Kabui
2021-09-14function to generate rand str for imageAlexander Kabui
2021-09-14plot plotDendroAndColors and generate pngAlexander Kabui
2021-09-14construct gene co-expression network & module detectionAlexander Kabui
2021-09-14compute the softthreshholdAlexander Kabui
2021-09-14Checking data for excessive missing valuesAlexander Kabui
2021-09-14load the required data for analysisAlexander Kabui
2021-09-14init commit for wgcna scriptAlexander Kabui
2021-08-28README: updated install instructionsPjotr Prins
2021-08-28Add explanation of using a guix profilePjotr Prins
2021-08-28Fix issue that caused R/qtl to not use the first covariate when using stratif...zsloan
2021-08-26Added # permutations to verbose printzsloan
2021-08-20Minor correlation fixes (#36)Alexander Kabui
2021-08-18Test the clusteringMuriithi Frederick Muriuki
2021-08-18Fix obvious linting errorsMuriithi Frederick Muriuki
2021-08-18Make child sequence a listMuriithi Frederick Muriuki
2021-08-18Provide top-level `riset` key-value pairMuriithi Frederick Muriuki
2021-08-18Add tests and fix errors caught with testsMuriithi Frederick Muriuki
2021-08-18Fix errors: add in missing parenthesisMuriithi Frederick Muriuki
2021-08-18Initialise heatmap generation moduleMuriithi Frederick Muriuki
2021-08-16Merge pull request #32 from genenetwork/heatmap_decompose_db_retrievalBonfaceKilz
2021-08-12Fix linting errorsMuriithi Frederick Muriuki
2021-08-12Import missing definitionsMuriithi Frederick Muriuki
2021-08-11use normal function for correlation (#34)Alexander Kabui
2021-08-09Build up the heatmap dataMuriithi Frederick Muriuki
2021-08-09Set up the trait dataset type correctlyMuriithi Frederick Muriuki
2021-08-09Retrieve the trait dataMuriithi Frederick Muriuki
2021-08-09Add missing arguments. Fix typo.Muriithi Frederick Muriuki
2021-08-09Fix linting errorsMuriithi Frederick Muriuki
2021-08-08Update testsMuriithi Frederick Muriuki
2021-08-08Only load extra data if the traits have basic infoMuriithi Frederick Muriuki
2021-08-08Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...Muriithi Frederick Muriuki
2021-08-07Add gunicorn support for productionPjotr Prins
2021-08-07Update info on running guix containerPjotr Prins
2021-08-05db: traits: Return unique values when fetching sample dataBonfaceKilz
2021-08-05Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...Muriithi Frederick Muriuki
2021-08-05Reorganise the database codeMuriithi Frederick Muriuki
2021-08-05Build up trait_name items from full nameMuriithi Frederick Muriuki
2021-08-04Fix issues caught by pylintMuriithi Frederick Muriuki
2021-08-04Retrieve the RISet and RISet ID valuesMuriithi Frederick Muriuki
2021-08-04Add tests for post-processing functionsMuriithi Frederick Muriuki
2021-08-04sql: Add documentation extracted from within the database.Arun Isaac
2021-08-04Update testsMuriithi Frederick Muriuki
2021-08-04Avoid string interpolation: use prepared statementMuriithi Frederick Muriuki
2021-08-04Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...Muriithi Frederick Muriuki
2021-08-03guix.scm: Add csvdiff as a propagated inputBonfaceKilz
2021-08-02sql: Document the table Strain.Arun Isaac
2021-07-31sql: Add schema description.Arun Isaac
2021-07-30Rework db functions to enable postprocessingMuriithi Frederick Muriuki
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