index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2023-06-23
Fetch all collections, rename variables
Frederick Muriuki Muriithi
2023-06-20
Fix conflicts
zsloan
2023-06-20
Bug: Don't overwrite/delete old collections
Frederick Muriuki Muriithi
2023-06-15
Fetch genotypes from virtuoso
Munyoki Kilyungi
2023-06-13
Namespace session variable
Frederick Muriuki Muriithi
2023-06-12
Delete unused import
Munyoki Kilyungi
2023-06-12
Fetch phenotypes from virtuoso
Munyoki Kilyungi
2023-06-12
Correct publication function docstring
Munyoki Kilyungi
2023-06-12
Delete unused get_trait_metadata function
Munyoki Kilyungi
2023-06-08
Fix bugs with accessing/creating collections
zsloan
2023-06-08
bug: Function expects pathlib.Path not str
Frederick Muriuki Muriithi
2023-06-07
auth: Remove "migrate-data" scope.
Frederick Muriuki Muriithi
2023-06-07
auth: Remove obsoleted scope
Frederick Muriuki Muriithi
2023-06-07
Add publication end-point
Munyoki Kilyungi
2023-06-07
Nest duplicate entries into a list from a sparql result
Munyoki Kilyungi
2023-06-07
Remove trait_metadata endpoint
Munyoki Kilyungi
2023-06-06
Pass geoSeries as a URL
Munyoki Kilyungi
2023-06-06
Rename gn:geoPlatform -> gn:geoPlatformUrl
Munyoki Kilyungi
2023-06-06
Match how dataset metadata is fetched with GN1
Munyoki Kilyungi
2023-06-06
Replace taxon prefix with ncbiTaxon which references NCBI
Munyoki Kilyungi
2023-06-06
Rename dataset_metadata -> dataset
Munyoki Kilyungi
2023-06-05
Logging: Don't allow getting user info to stop application starting
Frederick Muriuki Muriithi
2023-06-05
Logging: Get user information.
Frederick Muriuki Muriithi
2023-06-05
Logging: Get guix profile information if present.
Frederick Muriuki Muriithi
2023-06-05
Logging: Get info about python
Frederick Muriuki Muriithi
2023-06-05
Handle unhandled SQLite3 errors.
Frederick Muriuki Muriithi
2023-06-02
Replace SELECT with CONSTRUCT when fetching a dataset's metadata
Munyoki Kilyungi
2023-06-02
Create a function for stripping the last bit from a URL
Munyoki Kilyungi
2023-06-02
auth: Increase limit to 100K records
Frederick Muriuki Muriithi
2023-06-02
auth: Add delay between DB inserts
Frederick Muriuki Muriithi
2023-06-02
Auth: Bug: Display all admins before taking choice
Frederick Muriuki Muriithi
2023-05-31
scripts: Write table checksums into index.
Arun Isaac
2023-05-31
scripts: Introduce SQLTableClause.
Arun Isaac
2023-05-31
scripts: Fold long lines.
Arun Isaac
2023-05-31
scripts: Ensure only one indexing job may run at a time.
Arun Isaac
2023-05-30
Fix linting errors and failing tests
Frederick Muriuki Muriithi
2023-05-30
Provide logout link.
Frederick Muriuki Muriithi
2023-05-30
Enable registering sys-admin on CLI
Frederick Muriuki Muriithi
2023-05-30
auth: Change check for client secret
Frederick Muriuki Muriithi
2023-05-29
auth: Enable registration of OAuth2 clients
Frederick Muriuki Muriithi
2023-05-29
Enable Administrator login on GN3
Frederick Muriuki Muriithi
2023-05-29
Move docs to Gemtext repo.
Frederick Muriuki Muriithi
2023-05-27
Document Use of OAuth2 Clients
Frederick Muriuki Muriithi
2023-05-27
Add notes on retrieving user IDs
Frederick Muriuki Muriithi
2023-05-26
Document CLI Utility Commands
Frederick Muriuki Muriithi
2023-05-25
Add some error checks.
Frederick Muriuki Muriithi
2023-05-25
Script to assign existing data to publicly-visible resources
Frederick Muriuki Muriithi
2023-05-25
Set whether resource is publicly viewable on creation
Frederick Muriuki Muriithi
2023-05-23
auth: Enable user masquerade
Frederick Muriuki Muriithi
2023-05-23
Document how to log out information in GN3
Frederick Muriuki Muriithi
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