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2023-07-23this worksPjotr Prins
2023-07-22Trying stuffPjotr Prins
2023-07-22This worksPjotr Prins
2023-07-21This does not workPjotr Prins
2023-07-18Now we hangPjotr Prins
2023-07-18Handling matrixPjotr Prins
2023-07-17Trying stuffPjotr Prins
2023-07-17refactoringPjotr Prins
2023-07-17refactoringPjotr Prins
2023-07-12SPARQL parsingPjotr Prins
2023-07-12Handle multi-valuePjotr Prins
2023-07-11Return SPARQL responsePjotr Prins
2023-07-11Progressing SPARQLPjotr Prins
2023-07-10Execute SPARQL and get s-expPjotr Prins
2023-07-10Trying SPARQLPjotr Prins
2023-07-10fixing meta-infoPjotr Prins
2023-07-08guile server: adding docstringsPjotr Prins
2023-07-08guile server: more meta infoPjotr Prins
2023-07-08guile server: updated README to run interactive development with emacs-geiserPjotr Prins
2023-07-08guile server: try meta examplePjotr Prins
2023-07-08guile server: indentPjotr Prins
2023-07-06guile server: switching to fiber webPjotr Prins
2023-07-06guile server: switching to fiber webPjotr Prins
2023-07-06guile: propose adding end points to outputPjotr Prins
2023-07-05Kicked of guile REST APIPjotr Prins
2023-07-05Skip tests broken by Python-3.10 temporarily...Skip the tests that have been broken by the migrations to Python-3.10 temporarily, until we can fix them. Frederick Muriuki Muriithi
2023-07-05Update test: create throw-away variable...* Commit `b529c700` changes the return value to a tuple of values rather than a single string value. Handle that in the test. Frederick Muriuki Muriithi
2023-07-04Fix minor UI bugFrederick Muriuki Muriithi
2023-07-03Spruce up UI...Make UI somewhat consistent with the GN2 UI. Frederick Muriuki Muriithi
2023-07-03Enable deletion of OAuth2 clients.Frederick Muriuki Muriithi
2023-06-30Edit some of the details of OAuth2 clientsFrederick Muriuki Muriithi
2023-06-30List all OAuth2 clients.Frederick Muriuki Muriithi
2023-06-23Fetch all collections, rename variables...Fetch from `__REDIS_COLLECTION_KEY__` not `"collections"` to ensure all collections are retrieved correctly. Rename from `__*_DOC__` to `__REDIS_*_KEY__` to more clearly express what the variables are about. Frederick Muriuki Muriithi
2023-06-20Fix conflictszsloan
2023-06-20Bug: Don't overwrite/delete old collectionsFrederick Muriuki Muriithi
2023-06-15Fetch genotypes from virtuoso...* gn3/api/metadata.py: Import get_genotype_metadata. (genotype): New end-point. * gn3/db/rdf.py (get_phenotype_metadata): New function. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2023-06-13Namespace session variable...Extract the functions acting on the session into a separate module and namespace the session variable to prevent conflicts. Frederick Muriuki Muriithi
2023-06-12Delete unused import...Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2023-06-12Fetch phenotypes from virtuoso...* gn3/api/metadata.py: Import get_phenotype_metadata. (phenotype): New end-point. * gn3/db/rdf.py (get_phenotype_metadata): New function. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2023-06-12Correct publication function docstring...* gn3/api/metadata.py (publication): Update docstring. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2023-06-12Delete unused get_trait_metadata function...Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2023-06-08Fix bugs with accessing/creating collectionszsloan
2023-06-08bug: Function expects pathlib.Path not strFrederick Muriuki Muriithi
2023-06-07auth: Remove "migrate-data" scope....Scope is superceded by CLI utility script. Frederick Muriuki Muriithi
2023-06-07auth: Remove obsoleted scopeFrederick Muriuki Muriithi
2023-06-07Add publication end-point...* gn3/api/metadata.py: Import get_publication_metadata (publication): New endpoint. * gn3/db/rdf.py (get_dataset_metadata): New function. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2023-06-07Nest duplicate entries into a list from a sparql result...Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2023-06-07Remove trait_metadata endpoint...* gn3/api/metadata.py: Remove get_trait_metadata import. (trait_metadata): Delete. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2023-06-06Pass geoSeries as a URL...Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2023-06-06Rename gn:geoPlatform -> gn:geoPlatformUrl...Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
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