genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-06-07	tests: test_phenotype: Rename to test_db	BonfaceKilz
2021-06-07	gn3: db: sort imports	BonfaceKilz
2021-06-03	gn3: db: Remove "escape_string" from imports	BonfaceKilz
2021-06-03	Use prepared statements for FETCH sql function	BonfaceKilz
2021-06-03	gn3: db: Replace items() with keys()	BonfaceKilz
2021-06-03	Use prepared statements for UPDATE sql function	BonfaceKilz
2021-06-03	tests: test_audit: Update test case to check for prepared statements	BonfaceKilz
2021-06-03	gn3: db: Add new function for doing sql INSERT	BonfaceKilz
2021-06-03	sql: Add a new folder that houses sql statements for new tables	BonfaceKilz
2021-06-03	Add data structures for the table metadata_audit	BonfaceKilz
2021-06-03	gn3: db: Add spacing before around "AND" in sql clause	BonfaceKilz
2021-06-03	unit: test_phenotypes: Test for multiple "WHERE" clauses	BonfaceKilz
2021-06-03	Get the diff between 2 dicts and return that as a dict	BonfaceKilz
2021-06-03	gn3: db: Return None if data and where are empty	BonfaceKilz
2021-05-30	fix index error (#16)	Alexander Kabui
2021-05-26	Move the methods, "update" and "fetch", to gn3.db	BonfaceKilz
2021-05-26	db: phenotypes: Fix publication_mapping	BonfaceKilz
2021-05-26	db: phenotypes: Fix typo	BonfaceKilz
2021-05-25	Include code that processes rqtl output files and returns actual results inst...	zsloan
2021-05-20	tests: test_phenotype: Add function that tests "fetchone"	BonfaceKilz
2021-05-20	db: phenotypes: Add function for fetching a single result	BonfaceKilz
2021-05-20	db: phenotypes: Add a dataclass map	BonfaceKilz
2021-05-20	db: phenotypes: Add Publication table mapping	BonfaceKilz
2021-05-20	db: phenotypes: Rename phenotype_column_mapping	BonfaceKilz
2021-05-20	db: phenotypes: Add Publication dataclass and mapping	BonfaceKilz
2021-05-20	db: phenotypes: Update failing tests	BonfaceKilz
2021-05-20	db: phenotypes: Generalise the update function	BonfaceKilz
2021-05-20	db: phenotypes: Map a table to it's relevant dict mapping	BonfaceKilz
2021-05-20	db: phenotypes: Add type for Dataclass	BonfaceKilz
2021-05-20	db: phenotypes: Put mapping def after dataclass	BonfaceKilz
2021-05-20	db: phenotypes: Add phenotype table mapping	BonfaceKilz
2021-05-20	db: phenotypes: Add dataclass to represent PublishXRef	BonfaceKilz
2021-05-20	db: phenotype: Make "pylint: disable=[R0902]" global for file	BonfaceKilz
2021-05-20	tests: test_phenotypes: New test cases for loading phenotypes	BonfaceKilz
2021-05-20	db: phenotypes: Add a way of updating the Phenotype table	BonfaceKilz
2021-05-19	Merge branch 'main' of https://github.com/genenetwork/genenetwork3 into featu...	zsloan
2021-05-19	Add r-optparse to guix.scm	Pjotr Prins
2021-05-19	Temporarily replace forward-slashes with underscores, since they can be inclu...	zsloan
2021-05-19	Merge branch 'main' of https://github.com/genenetwork/genenetwork3 into featu...	zsloan
2021-05-19	Added R and r-qtl	Pjotr Prins
2021-05-19	More SQL optimization trials	Pjotr Prins
2021-05-19	Fix SQL query	Pjotr Prins
2021-05-19	SQL query gives different result	Pjotr Prins
2021-05-19	New SQL approach	Pjotr Prins
2021-05-18	Added test for compose_rqtl_cmd in tests/unit/test_commands.py	zsloan
2021-05-18	Removed len from this if statement, since an empty list evaluates to False by...	zsloan
2021-05-18	Added unit test for computations/rqtl.py	zsloan
2021-05-18	Account for boolean kwargs in compute() by storing them in a list, since they...	zsloan
2021-05-18	Account for boolean kwargs in compose_rqtl_cmd	zsloan
2021-05-18	Fixed generate_rqtl_cmd to make the kwarg hash from a combination of keywords...	zsloan