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2021-09-03Add covarstruct as a possible keyword for the rqtl_wrapper.R script (not inte...zsloan
2021-09-01Fix linting and typing issuesMuriithi Frederick Muriuki
2021-09-01Built top-level genotype file parsing functionMuriithi Frederick Muriuki
2021-09-01Parse data lines into markersMuriithi Frederick Muriuki
2021-09-01Parse the genotype file's data headerMuriithi Frederick Muriuki
2021-09-01Implement parsing of genotype labelsMuriithi Frederick Muriuki
2021-08-31Fix linting errors, minor bugs and reorganise codeMuriithi Frederick Muriuki
2021-08-31Update `heatmap_data` function: remove extraneous dataMuriithi Frederick Muriuki
2021-08-31Fix testMuriithi Frederick Muriuki
2021-08-31Parse QTLReaper outputsMuriithi Frederick Muriuki
2021-08-31Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_gener...Muriithi Frederick Muriuki
2021-08-31Fix bugs with `run_reaper` functionMuriithi Frederick Muriuki
2021-08-31Provide utilities for genotype filesMuriithi Frederick Muriuki
2021-08-30Update documentation on genotype filesMuriithi Frederick Muriuki
2021-08-30Fix issues with traits file formatMuriithi Frederick Muriuki
2021-08-30Remove empty lineMuriithi Frederick Muriuki
2021-08-30Fix some linting errors and minor bugs.Muriithi Frederick Muriuki
2021-08-30Implement module for interfacing with rust-qtlreaperMuriithi Frederick Muriuki
2021-08-30Document acquired knowledge on `rust-qtlreaper`Muriithi Frederick Muriuki
2021-08-28README: updated install instructionsPjotr Prins
2021-08-28Add explanation of using a guix profilePjotr Prins
2021-08-28Fix issue that caused R/qtl to not use the first covariate when using stratif...zsloan
2021-08-27Test out generation of traits fileMuriithi Frederick Muriuki
2021-08-27Provide intermediate data in final resultsMuriithi Frederick Muriuki
2021-08-27Export trait data to fileMuriithi Frederick Muriuki
2021-08-27Rework strains and trait values retrievalMuriithi Frederick Muriuki
2021-08-26Added # permutations to verbose printzsloan
2021-08-26Update imported module nameMuriithi Frederick Muriuki
2021-08-26Add rust-qtlreaperMuriithi Frederick Muriuki
2021-08-20Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_gener...Muriithi Frederick Muriuki
2021-08-20Fix typing issue(s) caught by mypyMuriithi Frederick Muriuki
2021-08-20Retrieve the strains with valid valuesMuriithi Frederick Muriuki
2021-08-20Add tests for ordering and implement functionMuriithi Frederick Muriuki
2021-08-20Minor correlation fixes (#36)Alexander Kabui
2021-08-18Test the clusteringMuriithi Frederick Muriuki
2021-08-18Fix obvious linting errorsMuriithi Frederick Muriuki
2021-08-18Make child sequence a listMuriithi Frederick Muriuki
2021-08-18Provide top-level `riset` key-value pairMuriithi Frederick Muriuki
2021-08-18Add tests and fix errors caught with testsMuriithi Frederick Muriuki
2021-08-18Fix errors: add in missing parenthesisMuriithi Frederick Muriuki
2021-08-18Initialise heatmap generation moduleMuriithi Frederick Muriuki
2021-08-17Test the clusteringMuriithi Frederick Muriuki
2021-08-17Fix obvious linting errorsMuriithi Frederick Muriuki
2021-08-17Make child sequence a listMuriithi Frederick Muriuki
2021-08-17Provide top-level `riset` key-value pairMuriithi Frederick Muriuki
2021-08-17Add tests and fix errors caught with testsMuriithi Frederick Muriuki
2021-08-17Fix errors: add in missing parenthesisMuriithi Frederick Muriuki
2021-08-16Merge branch 'main' into heatmap_generationMuriithi Frederick Muriuki
2021-08-16Merge pull request #32 from genenetwork/heatmap_decompose_db_retrievalBonfaceKilz
2021-08-12Initialise heatmap generation moduleMuriithi Frederick Muriuki
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