Age | Commit message (Expand) | Author |
2021-09-17 | Return path to generated filename for now | Frederick Muriuki Muriithi |
2021-09-17 | Fix some layout issues and update colorscale | Frederick Muriuki Muriithi |
2021-09-17 | Create dendrogram to show clustering tree | Frederick Muriuki Muriithi |
2021-09-16 | pylint fixes | Alexander Kabui |
2021-09-16 | Add WGCNA_SCRIT env to settings | Alexander Kabui |
2021-09-16 | init tests for wgcna | Alexander Kabui |
2021-09-16 | pass user input to call script | Alexander Kabui |
2021-09-16 | Intergrate the heatmap generation with the API | Frederick Muriuki Muriithi |
2021-09-16 | Fix minor bugs | Frederick Muriuki Muriithi |
2021-09-16 | Add missing imports | Frederick Muriuki Muriithi |
2021-09-16 | run cmd and add exception handler | Alexander Kabui |
2021-09-16 | register wgcna blueprint | Alexander Kabui |
2021-09-16 | add initial endpoint for wgcna | Alexander Kabui |
2021-09-16 | add function to compose and run wgcna script | Alexander Kabui |
2021-09-16 | function to parse form data and write to json file | Alexander Kabui |
2021-09-15 | initial test file for wgcna | Alexander Kabui |
2021-09-15 | init wgcna file to run r script and preprocess data | Alexander Kabui |
2021-09-15 | remove golang package causing build failure | Alexander Kabui |
2021-09-15 | Update entry-point function for heatmap generation | Frederick Muriuki Muriithi |
2021-09-15 | Generate heatmaps in a single plot | Frederick Muriuki Muriithi |
2021-09-15 | Process data into format usable by heatmaps | Frederick Muriuki Muriithi |
2021-09-15 | Integrate get_lsr_from_chr function | Frederick Muriuki Muriithi |
2021-09-15 | Reorganise modules | Frederick Muriuki Muriithi |
2021-09-15 | Fix format of arguments and expected values | Frederick Muriuki Muriithi |
2021-09-15 | Add missing sample file for tests | Frederick Muriuki Muriithi |
2021-09-15 | minor fixes | Alexander Kabui |
2021-09-15 | rename variables && delete debugs | Alexander Kabui |
2021-09-15 | Fetch IMAGE_DIR env and add img location | Alexander Kabui |
2021-09-14 | remove debug statements | Alexander Kabui |
2021-09-14 | function to generate rand str for image | Alexander Kabui |
2021-09-14 | plot plotDendroAndColors and generate png | Alexander Kabui |
2021-09-14 | construct gene co-expression network & module detection | Alexander Kabui |
2021-09-14 | compute the softthreshhold | Alexander Kabui |
2021-09-14 | Checking data for excessive missing values | Alexander Kabui |
2021-09-14 | load the required data for analysis | Alexander Kabui |
2021-09-14 | init commit for wgcna script | Alexander Kabui |
2021-09-09 | Update proof-of-concept code | Muriithi Frederick Muriuki |
2021-09-08 | Ease search for traits and chromosomes | Muriithi Frederick Muriuki |
2021-09-08 | Parse Chr value as int where possible | Muriithi Frederick Muriuki |
2021-09-08 | Remove extraneous text to ease sorting | Muriithi Frederick Muriuki |
2021-09-08 | Fix the traits order computations for clustering | Muriithi Frederick Muriuki |
2021-09-06 | Provide function to organise parsed QTLReaper results | Muriithi Frederick Muriuki |
2021-09-06 | Leave "Chr" value as string when parsing | Muriithi Frederick Muriuki |
2021-09-06 | Handle type-coercion exceptions | Muriithi Frederick Muriuki |
2021-09-06 | Find nearest marker | Muriithi Frederick Muriuki |
2021-09-03 | Add covarstruct as a possible keyword for the rqtl_wrapper.R script (not inte... | zsloan |
2021-09-01 | Fix linting and typing issues | Muriithi Frederick Muriuki |
2021-09-01 | Built top-level genotype file parsing function | Muriithi Frederick Muriuki |
2021-09-01 | Parse data lines into markers | Muriithi Frederick Muriuki |
2021-09-01 | Parse the genotype file's data header | Muriithi Frederick Muriuki |