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2022-01-10Add optimised entry for partial correlationsFrederick Muriuki Muriithi
2022-01-10Rework database functions to fetch multiple itemsFrederick Muriuki Muriithi
2022-01-05Merge pull request #64 from jgarte/type-hint-normalize-valuesBonfaceKilz
2022-01-05Merge pull request #69 from genenetwork/fix/check-for-duplicates-before-delet...BonfaceKilz
2022-01-05Merge branch 'main' into fix/check-for-duplicates-before-deletions-or-insertionsBonfaceKilz
2022-01-05Fix pylint errorsBonfaceKilz
2022-01-05test_traits.py: Update failing testBonfaceKilz
2022-01-04traits.py: Don't use "value" to check if a record existsBonfaceKilz
2022-01-04traits.py: Return early during an insert if the give record existsBonfaceKilz
2022-01-04traits.py Delete a record only if it existsBonfaceKilz
2022-01-01guix_deployPjotr Prins
2022-01-01guix_deployPjotr Prins
2021-12-24Fix typing errorsFrederick Muriuki Muriithi
2021-12-24Fix linting errorsFrederick Muriuki Muriithi
2021-12-24Fix sortingFrederick Muriuki Muriithi
2021-12-24Return the correlation method usedFrederick Muriuki Muriithi
2021-12-24Replace `NaN` with `null` in JSON stringFrederick Muriuki Muriithi
2021-12-24Encode the data to JSON and set the status codeFrederick Muriuki Muriithi
2021-12-24Reduce the total amount of data to be outputFrederick Muriuki Muriithi
2021-12-24Add dataset type to the resultsFrederick Muriuki Muriithi
2021-12-24Add API endpoint for partial correlationsFrederick Muriuki Muriithi
2021-12-23db: Assist mypy with explicit type declaration.Arun Isaac
2021-12-23db: Fix sparql_query return type.Arun Isaac
2021-12-23db: Fix wrong continued indentation.Arun Isaac
2021-12-23pylintrc: Disable fixme check.Arun Isaac
2021-12-22Refactor wgcna (#63)Alexander Kabui
2021-12-17Add "success" status to final computation resultsFrederick Muriuki Muriithi
2021-12-17Add API endpoint for partial correlationsFrederick Muriuki Muriithi
2021-12-14linting: Fix obvious linting issuesFrederick Muriuki Muriithi
2021-12-14Fix bug: expects int, gets object - Fixed.Frederick Muriuki Muriithi
2021-12-14mypy: ignore some imports and errorsFrederick Muriuki Muriithi
2021-12-14Adds type hint for normalize_values functionjgart
2021-12-14Provide expected values to use for testsFrederick Muriuki Muriithi
2021-12-14TO REVERT: Add logging to see data frameFrederick Muriuki Muriithi
2021-12-14Remove any items with less than 3 samplesFrederick Muriuki Muriithi
2021-12-14Fix dataset: use target dataset not primaryFrederick Muriuki Muriithi
2021-12-14Set explicit formatting for sequences in queriesFrederick Muriuki Muriithi
2021-12-13Provide missing functionFrederick Muriuki Muriithi
2021-12-13Fix the removal of controls for corresponding Nones in targetsFrederick Muriuki Muriithi
2021-12-13Return the primary and control traits in addition to resultsFrederick Muriuki Muriithi
2021-12-13Run partial correlations against chosen databaseFrederick Muriuki Muriithi
2021-12-13Fix errors with queryFrederick Muriuki Muriithi
2021-12-10Remove pull request template.Arun Isaac
2021-12-10Fix parametersFrederick Muriuki Muriithi
2021-12-10format normalize function doc stringAlexander Kabui
2021-12-10minor pr fixesAlexander Kabui
2021-12-10rename variablesAlexander Kabui
2021-12-10try and catch for non matching sample keysAlexander Kabui
2021-12-10update function docs for normalizing strain valuesAlexander Kabui
2021-12-10refactor sample r unittestsAlexander Kabui
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