index
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genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2021-05-30
fix index error (#16)
Alexander Kabui
2021-05-26
Move the methods, "update" and "fetch", to gn3.db
BonfaceKilz
2021-05-26
db: phenotypes: Fix publication_mapping
BonfaceKilz
2021-05-26
db: phenotypes: Fix typo
BonfaceKilz
2021-05-25
Include code that processes rqtl output files and returns actual results inst...
zsloan
2021-05-20
tests: test_phenotype: Add function that tests "fetchone"
BonfaceKilz
2021-05-20
db: phenotypes: Add function for fetching a single result
BonfaceKilz
2021-05-20
db: phenotypes: Add a dataclass map
BonfaceKilz
2021-05-20
db: phenotypes: Add Publication table mapping
BonfaceKilz
2021-05-20
db: phenotypes: Rename phenotype_column_mapping
BonfaceKilz
2021-05-20
db: phenotypes: Add Publication dataclass and mapping
BonfaceKilz
2021-05-20
db: phenotypes: Update failing tests
BonfaceKilz
2021-05-20
db: phenotypes: Generalise the update function
BonfaceKilz
2021-05-20
db: phenotypes: Map a table to it's relevant dict mapping
BonfaceKilz
2021-05-20
db: phenotypes: Add type for Dataclass
BonfaceKilz
2021-05-20
db: phenotypes: Put mapping def after dataclass
BonfaceKilz
2021-05-20
db: phenotypes: Add phenotype table mapping
BonfaceKilz
2021-05-20
db: phenotypes: Add dataclass to represent PublishXRef
BonfaceKilz
2021-05-20
db: phenotype: Make "pylint: disable=[R0902]" global for file
BonfaceKilz
2021-05-20
tests: test_phenotypes: New test cases for loading phenotypes
BonfaceKilz
2021-05-20
db: phenotypes: Add a way of updating the Phenotype table
BonfaceKilz
2021-05-19
Merge branch 'main' of https://github.com/genenetwork/genenetwork3 into featu...
zsloan
2021-05-19
Add r-optparse to guix.scm
Pjotr Prins
2021-05-19
Temporarily replace forward-slashes with underscores, since they can be inclu...
zsloan
2021-05-19
Merge branch 'main' of https://github.com/genenetwork/genenetwork3 into featu...
zsloan
2021-05-19
Added R and r-qtl
Pjotr Prins
2021-05-19
More SQL optimization trials
Pjotr Prins
2021-05-19
Fix SQL query
Pjotr Prins
2021-05-19
SQL query gives different result
Pjotr Prins
2021-05-19
New SQL approach
Pjotr Prins
2021-05-18
Added test for compose_rqtl_cmd in tests/unit/test_commands.py
zsloan
2021-05-18
Removed len from this if statement, since an empty list evaluates to False by...
zsloan
2021-05-18
Added unit test for computations/rqtl.py
zsloan
2021-05-18
Account for boolean kwargs in compute() by storing them in a list, since they...
zsloan
2021-05-18
Account for boolean kwargs in compose_rqtl_cmd
zsloan
2021-05-18
Fixed generate_rqtl_cmd to make the kwarg hash from a combination of keywords...
zsloan
2021-05-18
Slow SQL: add note
Pjotr Prins
2021-05-18
Add original SQL query
Pjotr Prins
2021-05-18
Notes on SQL query
Pjotr Prins
2021-05-18
Fixed variety of issues detected by pylint
zsloan
2021-05-17
Created compose_rqtl_command and generate_rqtl_command to create the actual c...
zsloan
2021-05-17
Read in kwargs fromrequest and pass the command, tmpdir, and kwargs to genera...
zsloan
2021-05-17
Added RQTL_WRAPPER_CMD (which is fetched from environment) in settings.py
zsloan
2021-05-17
Add rqtl.py for rqtl endpoints
zsloan
2021-05-17
Register rqtl blueprint
zsloan
2021-05-17
Merge pull request #11 from genenetwork/feature/minor-fixes
BonfaceKilz
2021-05-15
resolve merge conflict
Alexander Kabui
2021-05-15
Merge branch 'main' into feature/minor-fixes
Alexander Kabui
2021-05-15
index lit tuple result
Alexander Kabui
2021-05-14
README
Pjotr Prins
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