aboutsummaryrefslogtreecommitdiff
path: root/tests
diff options
context:
space:
mode:
Diffstat (limited to 'tests')
-rw-r--r--tests/unit/computations/test_qtlreaper.py92
1 files changed, 46 insertions, 46 deletions
diff --git a/tests/unit/computations/test_qtlreaper.py b/tests/unit/computations/test_qtlreaper.py
index 1d7347f..495ed97 100644
--- a/tests/unit/computations/test_qtlreaper.py
+++ b/tests/unit/computations/test_qtlreaper.py
@@ -130,49 +130,49 @@ class TestQTLReaper(TestCase):
"pValue": 1.000
}
]),
- [{"ID": "T1",
- "chromosomes": [
- {"Chr": "1",
- "loci": [
- {
- "Locus": "rs31443144", "cM": 1.500, "Mb": 3.010,
- "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
- },
- {
- "Locus": "rs6269442", "cM": 1.500, "Mb": 3.492,
- "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
- },
- {
- "Locus": "rs32285189", "cM": 1.630, "Mb": 3.511,
- "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
- },
- {
- "Locus": "rs258367496", "cM": 1.630, "Mb": 3.660,
- "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
- },
- {
- "Locus": "rs32430919", "cM": 1.750, "Mb": 3.777,
- "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
- },
- {
- "Locus": "rs36251697", "cM": 1.880, "Mb": 3.812,
- "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
- },
- {
- "Locus": "rs30658298", "cM": 2.010, "Mb": 4.431,
- "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
- }]},
- {"Chr": "2",
- "loci": [
- {
- "Locus": "rs51852623", "cM": 2.010, "Mb": 4.447,
- "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
- },
- {
- "Locus": "rs31879829", "cM": 2.140, "Mb": 4.519,
- "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
- },
- {
- "Locus": "rs36742481", "cM": 2.140, "Mb": 4.776,
- "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
- }]}]}])
+ {"T1": {"ID": "T1",
+ "chromosomes": {
+ 1: {"Chr": 1,
+ "loci": [
+ {
+ "Locus": "rs31443144", "cM": 1.500, "Mb": 3.010,
+ "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
+ },
+ {
+ "Locus": "rs6269442", "cM": 1.500, "Mb": 3.492,
+ "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
+ },
+ {
+ "Locus": "rs32285189", "cM": 1.630, "Mb": 3.511,
+ "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
+ },
+ {
+ "Locus": "rs258367496", "cM": 1.630, "Mb": 3.660,
+ "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
+ },
+ {
+ "Locus": "rs32430919", "cM": 1.750, "Mb": 3.777,
+ "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
+ },
+ {
+ "Locus": "rs36251697", "cM": 1.880, "Mb": 3.812,
+ "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
+ },
+ {
+ "Locus": "rs30658298", "cM": 2.010, "Mb": 4.431,
+ "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
+ }]},
+ 2: {"Chr": 2,
+ "loci": [
+ {
+ "Locus": "rs51852623", "cM": 2.010, "Mb": 4.447,
+ "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
+ },
+ {
+ "Locus": "rs31879829", "cM": 2.140, "Mb": 4.519,
+ "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
+ },
+ {
+ "Locus": "rs36742481", "cM": 2.140, "Mb": 4.776,
+ "LRS": 0.500, "Additive": -0.074, "pValue": 1.000
+ }]}}}})