diff options
Diffstat (limited to 'tests')
| -rw-r--r-- | tests/unit/db/test_traits.py | 40 |
1 files changed, 26 insertions, 14 deletions
diff --git a/tests/unit/db/test_traits.py b/tests/unit/db/test_traits.py index 6d2ba4d..95c5b27 100644 --- a/tests/unit/db/test_traits.py +++ b/tests/unit/db/test_traits.py @@ -1,22 +1,34 @@ """Tests for gn3/db/traits.py""" from unittest import mock, TestCase -from gn3.db.traits import retrieve_probeset_trait_name +from gn3.db.traits import retrieve_type_trait_name class TestTraitsDBFunctions(TestCase): "Test cases for traits functions" def test_retrieve_probeset_trait_name(self): """Test that the function is called correctly.""" - db_mock = mock.MagicMock() - with db_mock.cursor() as cursor: - cursor.fetchone.return_value = ( - "testName", "testNameFull", "testNameShort", "dataScale") - self.assertEqual( - retrieve_probeset_trait_name(9, "testName", db_mock), - ("testName", "testNameFull", "testNameShort", "dataScale")) - cursor.execute.assert_called_once_with( - "SELECT Id, Name, FullName, ShortName, DataScale " - "FROM ProbeSetFreeze " - "WHERE public > %(threshold)s AND " - "(Name = %(name)s OR FullName = %(name)s OR ShortName = %(name)s)", - {"threshold": 9, "name": "testName"}) + for trait_type, thresh, trait_name, columns in [ + ["ProbeSet", 9, "testName", + "Id, Name, FullName, ShortName, DataScale"], + ["Geno", 3, "genoTraitName", "Id, Name, FullName, ShortName"], + ["Publish", 6, "publishTraitName", + "Id, Name, FullName, ShortName"], + ["Temp", 4, "tempTraitName", "Id, Name, FullName, ShortName"]]: + db_mock = mock.MagicMock() + with self.subTest(trait_type=trait_type): + with db_mock.cursor() as cursor: + cursor.fetchone.return_value = ( + "testName", "testNameFull", "testNameShort", + "dataScale") + self.assertEqual( + retrieve_type_trait_name( + trait_type, thresh, trait_name, db_mock), + ("testName", "testNameFull", "testNameShort", + "dataScale")) + cursor.execute.assert_called_once_with( + "SELECT {cols} " + "FROM {ttype}Freeze " + "WHERE public > %(threshold)s AND " + "(Name = %(name)s OR FullName = %(name)s OR ShortName = %(name)s)".format( + cols=columns, ttype=trait_type), + {"threshold": thresh, "name": trait_name}) |