diff options
Diffstat (limited to 'tests')
| -rw-r--r-- | tests/unit/computations/test_rust_correlation.py | 19 |
1 files changed, 8 insertions, 11 deletions
diff --git a/tests/unit/computations/test_rust_correlation.py b/tests/unit/computations/test_rust_correlation.py index b402621..ac27dea 100644 --- a/tests/unit/computations/test_rust_correlation.py +++ b/tests/unit/computations/test_rust_correlation.py @@ -9,7 +9,6 @@ from gn3.computations.rust_correlation import generate_input_files from gn3.computations.rust_correlation import parse_correlation_output - @pytest.mark.unit_test def test_generate_input(): """test generating text files""" @@ -21,7 +20,8 @@ def test_generate_input(): ] - (_tmp_dir, tmp_file) = generate_input_files(test_dataset, output_dir="/tmp") + (_tmp_dir, tmp_file) = generate_input_files(test_dataset, + output_dir="/tmp") with open(tmp_file, "r", encoding="utf-8") as file_reader: test_results = [line.rstrip() for line in file_reader] @@ -35,16 +35,13 @@ def test_generate_input(): def test_json_file(): """test for generating json files """ - json_dict = {"tmp_dir": "/tmp/correlation", - - "tmp_file": "/data.txt", - "method": "pearson", - "file_path": "/data.txt", - "x_vals": "12.1,11.3,16.5,7.5,3.2", - "file_delimiter": ","} - tmp_file = generate_json_file(**json_dict) + tmp_file = generate_json_file(tmp_dir="/tmp/correlation", + tmp_file="/data.txt", + method="pearson", + x_vals="12.1,11.3,16.5,7.5,3.2", + delimiter=",") - with open(tmp_file, "r+",encoding="utf-8") as file_reader: + with open(tmp_file, "r+", encoding="utf-8") as file_reader: results = json.load(file_reader) assert results == { |