diff options
Diffstat (limited to 'tests')
-rw-r--r-- | tests/__init__.py | 0 | ||||
-rw-r--r-- | tests/unit/__init__.py | 0 | ||||
-rw-r--r-- | tests/unit/test_data/metadata.json | 9 | ||||
-rw-r--r-- | tests/unit/test_data/phenotype.tsv | 21 | ||||
-rw-r--r-- | tests/unit/test_file_utils.py | 20 |
5 files changed, 50 insertions, 0 deletions
diff --git a/tests/__init__.py b/tests/__init__.py new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/tests/__init__.py diff --git a/tests/unit/__init__.py b/tests/unit/__init__.py new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/tests/unit/__init__.py diff --git a/tests/unit/test_data/metadata.json b/tests/unit/test_data/metadata.json new file mode 100644 index 0000000..d7dd267 --- /dev/null +++ b/tests/unit/test_data/metadata.json @@ -0,0 +1,9 @@ +{ + "title": "This is my dataset for testing the REST API", + "description": "Longer description", + "date": "20210127", + "authors": [ + "R. W. Williams" + ], + "cross": "BXD" +} diff --git a/tests/unit/test_data/phenotype.tsv b/tests/unit/test_data/phenotype.tsv new file mode 100644 index 0000000..b9115ce --- /dev/null +++ b/tests/unit/test_data/phenotype.tsv @@ -0,0 +1,21 @@ + pheno +BXD01 5.060 +BXD02 307.866 +BXD03 185.400 +BXD04 380.729 +BXD05 150.066 +BXD06 94.483 +BXD07 438.700 +BXD08 NA +BXD09 130.457 +BXD10 184.900 +BXD11 223.400 +BXD12 167.250 +BXD13 313.950 +BXD14 219.383 +BXD15 277.800 +BXD16 6.467 +BXD17 364.967 +BXD18 132.016 +BXD19 468.133 +BXD20 309.500 diff --git a/tests/unit/test_file_utils.py b/tests/unit/test_file_utils.py new file mode 100644 index 0000000..e6109bb --- /dev/null +++ b/tests/unit/test_file_utils.py @@ -0,0 +1,20 @@ +"""Test cases for procedures defined in file_utils.py""" +import os +import unittest + +from gn3.file_utils import get_dir_hash + + +class TestFileUtils(unittest.TestCase): + """Test cases for procedures defined in file_utils.py""" + def test_get_dir_hash(self): + """Test that a directory is hashed correctly""" + test_dir = os.path.join(os.path.dirname(__file__), "test_data") + self.assertEqual("928a0e2e4846b4b3c2881d9c1d6cfce4", + get_dir_hash(test_dir)) + + def test_get_dir_hash_non_existent_dir(self): + """Test thata an error is raised when the dir does not exist""" + self.assertRaises(FileNotFoundError, + get_dir_hash, + "/non-existent-file") |