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-rw-r--r--tests/unit/db/test_phenotypes.py22
1 files changed, 22 insertions, 0 deletions
diff --git a/tests/unit/db/test_phenotypes.py b/tests/unit/db/test_phenotypes.py
index 6b394d7..9fed524 100644
--- a/tests/unit/db/test_phenotypes.py
+++ b/tests/unit/db/test_phenotypes.py
@@ -2,6 +2,7 @@
from unittest import TestCase
from unittest import mock
+from gn3.db.phenotypes import fetchone
from gn3.db.phenotypes import Phenotype
from gn3.db.phenotypes import update
@@ -41,3 +42,24 @@ class TestPhenotypes(TestCase):
"'Test Post Pub', Submitter = 'Rob' "
"WHERE id = '1'"
)
+
+ def test_fetch_phenotype(self):
+ """Test that a single phenotype is fetched properly
+
+ """
+ db_mock = mock.MagicMock()
+ with db_mock.cursor() as cursor:
+ test_data = (
+ 35, "Test pre-publication", "Test post-publication",
+ "Original description A", "cm^2", "pre-abbrev",
+ "post-abbrev", "LAB001", "R. W.", "R. W.", "R. W."
+ )
+ cursor.fetchone.return_value = test_data
+ phenotype = fetchone(db_mock,
+ "Phenotype",
+ where=Phenotype(id_=35))
+ self.assertEqual(phenotype.id_, 35)
+ self.assertEqual(phenotype.pre_pub_description,
+ "Test pre-publication")
+ cursor.execute.assert_called_once_with(
+ "SELECT * FROM Phenotype WHERE id = '35'")