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Diffstat (limited to 'tests/unit/test_heatmaps.py')
| -rw-r--r-- | tests/unit/test_heatmaps.py | 15 |
1 files changed, 15 insertions, 0 deletions
diff --git a/tests/unit/test_heatmaps.py b/tests/unit/test_heatmaps.py index b54e2f3..7b66688 100644 --- a/tests/unit/test_heatmaps.py +++ b/tests/unit/test_heatmaps.py @@ -2,6 +2,7 @@ from unittest import TestCase from gn3.heatmaps import ( cluster_traits, + get_loci_names, get_lrs_from_chr, export_trait_data, compute_traits_order, @@ -214,3 +215,17 @@ class TestHeatmap(TestCase): [0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5]], [[0.5, 0.579, 0.5], [0.5, 0.5, 0.5]]]) + + def test_get_loci_names(self): + """Check that loci names are retrieved correctly.""" + for organised, expected in ( + (organised_trait_1, + (("rs258367496", "rs30658298", "rs31443144", "rs32285189", + "rs32430919", "rs36251697", "rs6269442"), + ("rs31879829", "rs36742481", "rs51852623"))), + ({**organised_trait_1, **organised_trait_2}, + (("rs258367496", "rs30658298", "rs31443144", "rs32285189", + "rs32430919", "rs36251697", "rs6269442"), + ("rs31879829", "rs36742481", "rs51852623")))): + with self.subTest(organised=organised): + self.assertEqual(get_loci_names(organised, (1, 2)), expected) |