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Diffstat (limited to 'tests/integration/test_traits.py')
-rw-r--r-- | tests/integration/test_traits.py | 70 |
1 files changed, 70 insertions, 0 deletions
diff --git a/tests/integration/test_traits.py b/tests/integration/test_traits.py new file mode 100644 index 0000000..2f3433a --- /dev/null +++ b/tests/integration/test_traits.py @@ -0,0 +1,70 @@ +"""module contains integration tests for trait endpoints""" +from unittest import TestCase +from unittest import mock + +from gn3.app import create_app + + +class TraitIntegrationTest(TestCase): + """class contains integration tests for\ + traits""" + + def setUp(self): + self.app = create_app().test_client() + + def test_home(self): + """test for initial endpoint for trait""" + results = self.app.get("/api/trait", follow_redirects=True) + + self.assertEqual(200, results.status_code) + + @mock.patch("gn3.api.traits.fetch_trait") + def test_create_trait(self, mock_fetch_trait): + """test the endpoint for creating traits\ + endpoint requires trait name and dataset name""" + + trait_results = { + "dataset": None, + "trait_name": "1449593_at", + "trait_data": {} + + } + mock_fetch_trait.return_value = trait_results + + results = self.app.get( + "/api/trait/1449593_at/HC_M2_0606_P", follow_redirects=True) + + trait_data = results.get_json() + + self.assertEqual(results.status_code, 200) + self.assertEqual(trait_data, trait_results) + + @mock.patch("gn3.api.traits.get_trait_info_data") + def test_retrieve_trait_info(self, mock_get_trait_info): + """integration test for endpoints for retrieving\ + trait info expects the dataset of trait to have been + created""" + + trait_post_data = { + "trait": {"trait_name": ""}, + "trait_dataset": {"dataset_name": ""} + } + + expected_api_results = { + "description": "trait description", + "chr": "", + "locus": "", + "mb": "", + "abbreviation": "trait_abbreviation", + "trait_display_name": "trait_name" + + } + mock_get_trait_info.return_value = expected_api_results + + trait_info = self.app.post( + "/api/trait/trait_info/144_at", json=trait_post_data, follow_redirects=True) + + trait_info_results = trait_info.get_json() + + self.assertEqual(trait_info.status_code, 200) + self.assertEqual(trait_info_results, expected_api_results) |