diff options
Diffstat (limited to 'scripts')
-rw-r--r-- | scripts/laminar/gn3-lint.sh | 4 | ||||
-rw-r--r-- | scripts/laminar/gn3-mypy.sh | 4 | ||||
-rw-r--r-- | scripts/laminar/gn3-unittest.sh | 4 |
3 files changed, 6 insertions, 6 deletions
diff --git a/scripts/laminar/gn3-lint.sh b/scripts/laminar/gn3-lint.sh index b6f0c89..1299a96 100644 --- a/scripts/laminar/gn3-lint.sh +++ b/scripts/laminar/gn3-lint.sh @@ -4,7 +4,7 @@ set -e # Abort on first error CUR_DIR=$PWD GN3_CI_DIR=$HOME/CI/genenetwork3/ -cd $GN3_CI_DIR +cd "${GN3_CI_DIR}" git pull # Run Pylint @@ -12,4 +12,4 @@ env GUIX_PACKAGE_PATH="$HOME/guix-bioinformatics:$HOME/guix-past/modules" \ guix environment --load=guix.scm -- pylint sheepdog/worker.py gn3/ tests echo Done Running Pylint! -cd $CUR_DIR +cd "${CUR_DIR}" diff --git a/scripts/laminar/gn3-mypy.sh b/scripts/laminar/gn3-mypy.sh index a2a9782..6d04c35 100644 --- a/scripts/laminar/gn3-mypy.sh +++ b/scripts/laminar/gn3-mypy.sh @@ -4,7 +4,7 @@ set -e # Abort on first error CUR_DIR=$PWD GN3_CI_DIR=$HOME/CI/genenetwork3/ -cd $GN3_CI_DIR +cd "${GN3_CI_DIR}" git pull # Run Pylint @@ -12,4 +12,4 @@ env GUIX_PACKAGE_PATH="$HOME/guix-bioinformatics:$HOME/guix-past/modules" \ guix environment --load=guix.scm -- mypy . echo Done Running MyPy! -cd $CUR_DIR +cd "${CUR_DIR}" diff --git a/scripts/laminar/gn3-unittest.sh b/scripts/laminar/gn3-unittest.sh index 41dafe5..d18d5de 100644 --- a/scripts/laminar/gn3-unittest.sh +++ b/scripts/laminar/gn3-unittest.sh @@ -4,7 +4,7 @@ set -e # Abort on first error CUR_DIR=$PWD GN3_CI_DIR=$HOME/CI/genenetwork3/ -cd $GN3_CI_DIR +cd "${GN3_CI_DIR}" git pull # Run Pylint @@ -12,4 +12,4 @@ env GUIX_PACKAGE_PATH="$HOME/guix-bioinformatics:$HOME/guix-past/modules" \ guix environment --load=guix.scm -- python -m unittest discover echo Done Running Unittests! -cd $CUR_DIR +cd "${CUR_DIR}" |