diff options
Diffstat (limited to 'scripts/laminar')
-rwxr-xr-x | scripts/laminar/genenetwork3.init | 6 | ||||
-rwxr-xr-x | scripts/laminar/genenetwork3.run | 29 |
2 files changed, 35 insertions, 0 deletions
diff --git a/scripts/laminar/genenetwork3.init b/scripts/laminar/genenetwork3.init new file mode 100755 index 0000000..97379f5 --- /dev/null +++ b/scripts/laminar/genenetwork3.init @@ -0,0 +1,6 @@ +#!/bin/sh + +set -ex + +# Clone repository if it doesn't already exist +git clone "${GIT_REPO_URL}" . diff --git a/scripts/laminar/genenetwork3.run b/scripts/laminar/genenetwork3.run new file mode 100755 index 0000000..8b1e3d4 --- /dev/null +++ b/scripts/laminar/genenetwork3.run @@ -0,0 +1,29 @@ +#!/bin/sh + +set -e + + +( + # Lock directory + flock 9 + + # pull in latest changes + cd "${WORKSPACE}" + git fetch + git checkout "${GIT_COMMIT_REF}" + cd - + + for filename in "${WORKSPACE}"/* + do + if [ "${filename}" != ".git" ] + then + cp -vR "${filename}" . + fi + done +) 9>"${WORKSPACE}/lock" + +# Simultaneously trigger common checks +GN3_CI_DIR="$(pwd)" +laminarc run gn3-lint GN3_CI_DIR="${GN3_CI_DIR}" \ + gn3-mypy GN3_CI_DIR="${GN3_CI_DIR}" \ + gn3-unittest GN3_CI_DIR="${GN3_CI_DIR}" |