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-rwxr-xr-xscripts/index-genenetwork11
1 files changed, 10 insertions, 1 deletions
diff --git a/scripts/index-genenetwork b/scripts/index-genenetwork
index 4da82e4..f7d4415 100755
--- a/scripts/index-genenetwork
+++ b/scripts/index-genenetwork
@@ -20,6 +20,7 @@ import os
import pathlib
import resource
import shutil
+import sys
import tempfile
from typing import Callable, Generator, Iterable, List
@@ -359,7 +360,15 @@ def xapian_compact(combined_index: pathlib.Path, indices: List[pathlib.Path]) ->
def main(xapian_directory: str, sql_uri: str) -> None:
logging.basicConfig(level=os.environ.get("LOGLEVEL", "DEBUG"),
format='%(relativeCreated)s: %(levelname)s: %(message)s')
- pathlib.Path(xapian_directory).mkdir(exist_ok=True)
+
+ # Ensure no other build process is running.
+ if pathlib.Path(xapian_directory).exists():
+ logging.error("Build directory %s already exists; "
+ "perhaps another build process is running.",
+ xapian_directory)
+ sys.exit(1)
+
+ pathlib.Path(xapian_directory).mkdir()
with temporary_directory("combined", xapian_directory) as combined_index:
with temporary_directory("build", xapian_directory) as xapian_build_directory:
logging.info("Indexing genes")