diff options
Diffstat (limited to 'gn3')
| -rw-r--r-- | gn3/settings.py | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/gn3/settings.py b/gn3/settings.py index 6eec2a1..80cc7b4 100644 --- a/gn3/settings.py +++ b/gn3/settings.py @@ -2,6 +2,7 @@ import tempfile import os +import pathlib BCRYPT_SALT = "$2b$12$mxLvu9XRLlIaaSeDxt8Sle" # Change this! DATA_DIR = "" @@ -24,7 +25,9 @@ SECRET_KEY = "password" GN2_BASE_URL = "http://www.genenetwork.org/" -# wgcna script +# R script +R_SCRIPTS = pathlib.Path("./scripts/").absolute() + WGCNA_RSCRIPT = "wgcna_analysis.R" # qtlreaper command REAPER_COMMAND = f"{os.environ.get('GUIX_ENVIRONMENT')}/bin/qtlreaper" |