diff options
Diffstat (limited to 'gn3')
| -rw-r--r-- | gn3/db/datasets.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/gn3/db/datasets.py b/gn3/db/datasets.py index 9a05890..fbeb756 100644 --- a/gn3/db/datasets.py +++ b/gn3/db/datasets.py @@ -26,10 +26,10 @@ def retrieve_sample_list(group: str, inc_par: bool = True, inc_f1: bool = True): ) if par_f1_path.is_file(): with open(par_f1_path, encoding="utf-8") as par_f1_file: - par_f1s = json.load(par_f1_file)[group] - if inc_par: + par_f1s = json.load(par_f1_file).get(group, {}) + if inc_par and par_f1s: samplelist += [par_f1s['paternal']['strain'], par_f1s['maternal']['strain']] - if inc_f1: + if inc_f1 and par_f1s: samplelist += [f1['strain'] for f1 in par_f1s['f1s']] genofile_path = Path( |