diff options
Diffstat (limited to 'gn3')
| -rw-r--r-- | gn3/computations/gemma.py | 7 | ||||
| -rw-r--r-- | gn3/file_utils.py | 8 |
2 files changed, 8 insertions, 7 deletions
diff --git a/gn3/computations/gemma.py b/gn3/computations/gemma.py index 528f888..7ee70b0 100644 --- a/gn3/computations/gemma.py +++ b/gn3/computations/gemma.py @@ -1,7 +1,5 @@ """Procedures related gemma computations""" import os -import random -import string from base64 import b64encode from hashlib import md5 @@ -11,11 +9,6 @@ from typing import Optional from typing import ValuesView from gn3.commands import compose_gemma_cmd -def generate_random_n_string(n_length: int) -> str: - """Generate a random string that is N chars long""" - return ''.join(random.choice(string.ascii_uppercase + string.digits) - for _ in range(n_length)) - def generate_hash_of_string(unhashed_str: str) -> str: """Given an UNHASHED_STRING, generate it's md5 hash while removing the '==' at diff --git a/gn3/file_utils.py b/gn3/file_utils.py index d9301bb..cda4f2b 100644 --- a/gn3/file_utils.py +++ b/gn3/file_utils.py @@ -3,6 +3,8 @@ import hashlib import json import os import shutil +import random +import string import tarfile from functools import partial @@ -51,6 +53,12 @@ def jsonfile_to_dict(json_file: str) -> Dict: raise FileNotFoundError +def generate_random_n_string(n_length: int) -> str: + """Generate a random string that is N chars long""" + return ''.join(random.choice(string.ascii_uppercase + string.digits) + for _ in range(n_length)) + + def extract_uploaded_file(gzipped_file, target_dir: str) -> Dict: """Get the (directory) hash of extracted contents of GZIPPED_FILE; and move contents to TARGET_DIR/<dir-hash>. |