aboutsummaryrefslogtreecommitdiff
path: root/gn3
diff options
context:
space:
mode:
Diffstat (limited to 'gn3')
-rw-r--r--gn3/api/correlation.py4
-rw-r--r--gn3/computations/partial_correlations.py8
2 files changed, 6 insertions, 6 deletions
diff --git a/gn3/api/correlation.py b/gn3/api/correlation.py
index 5f2d486..3aadcb9 100644
--- a/gn3/api/correlation.py
+++ b/gn3/api/correlation.py
@@ -148,8 +148,8 @@ def partial_correlation():
trait_fullname(args["primary_trait"]),
tuple(
trait_fullname(trait) for trait in args["control_traits"]),
+ args["method"],
tuple(
- trait_fullname(trait) for trait in args["target_traits"]),
- args["method"])
+ trait_fullname(trait) for trait in args["target_traits"]))
return build_response({"status": "success", "results": results})
diff --git a/gn3/computations/partial_correlations.py b/gn3/computations/partial_correlations.py
index 530dd71..f316f67 100644
--- a/gn3/computations/partial_correlations.py
+++ b/gn3/computations/partial_correlations.py
@@ -681,7 +681,7 @@ def partial_correlations_with_target_db(# pylint: disable=[R0913, R0914, R0911]
check_res = check_for_common_errors(
conn, primary_trait_name, control_trait_names, threshold)
- if check_res.get("status") == "error":
+ if check_res.get("status") != "success":
return check_res
primary_trait = check_res["primary_trait"]
@@ -819,15 +819,15 @@ def partial_correlations_with_target_db(# pylint: disable=[R0913, R0914, R0911]
def partial_correlations_with_target_traits(
conn: Any, primary_trait_name: str,
- control_trait_names: Tuple[str, ...],
- target_trait_names: Tuple[str, ...], method: str) -> dict:
+ control_trait_names: Tuple[str, ...], method: str,
+ target_trait_names: Tuple[str, ...]) -> dict:
"""
Compute partial correlation against a specific selection of traits.
"""
threshold = 0
check_res = check_for_common_errors(
conn, primary_trait_name, control_trait_names, threshold)
- if check_res.get("status") == "error":
+ if check_res.get("status") != "success":
return check_res
target_traits = {