diff options
Diffstat (limited to 'gn3')
| -rw-r--r-- | gn3/computations/partial_correlations.py | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/gn3/computations/partial_correlations.py b/gn3/computations/partial_correlations.py index 231b0a7..ced44a4 100644 --- a/gn3/computations/partial_correlations.py +++ b/gn3/computations/partial_correlations.py @@ -517,7 +517,7 @@ def tissue_correlation_by_list( def partial_correlations_entry(# pylint: disable=[R0913, R0914, R0911] conn: Any, primary_trait_name: str, control_trait_names: Tuple[str, ...], method: str, - criteria: int, group: str, target_db_name: str) -> dict: + criteria: int, target_db_name: str) -> dict: """ This is the 'ochestration' function for the partial-correlation feature. @@ -533,6 +533,7 @@ def partial_correlations_entry(# pylint: disable=[R0913, R0914, R0911] corr_min_informative = 4 primary_trait = retrieve_trait_info(threshold, primary_trait_name, conn) + group = primary_trait["group"] primary_trait_data = retrieve_trait_data(primary_trait, conn) primary_samples, primary_values, _primary_variances = export_informative( primary_trait_data) |