diff options
Diffstat (limited to 'gn3/heatmaps.py')
| -rw-r--r-- | gn3/heatmaps.py | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/gn3/heatmaps.py b/gn3/heatmaps.py index adbfbc6..42231bf 100644 --- a/gn3/heatmaps.py +++ b/gn3/heatmaps.py @@ -224,7 +224,6 @@ def build_heatmap(traits_names, conn: Any): process_traits_data_for_heatmap( organised, traits_ids, chromosome_names), clustered, - "single_heatmap_{}".format(random_string(10)), y_axis=tuple( ordered_traits_names[traits_ids[order]] for order in traits_order), @@ -355,6 +354,9 @@ def generate_clustered_heatmap( loci_names: Sequence[Sequence[str]] = tuple(), output_dir: str = TMPDIR, colorscale=((0.0, '#0000FF'), (0.5, '#00FF00'), (1.0, '#FF0000'))): + data, clustering_data, x_axis=None, x_label: str = "", y_axis=None, + y_label: str = "", loci_names: Sequence[Sequence[str]] = tuple(), + colorscale=((0.0, '#0000FF'), (0.5, '#00FF00'), (1.0, '#FF0000'))): """ Generate a dendrogram, and heatmaps for each chromosome, and put them all into one plot. @@ -419,6 +421,4 @@ def generate_clustered_heatmap( showlegend=True, showscale=True, selector={"name": x_axis[-1]}) - image_filename = "{}/{}.html".format(output_dir, image_filename_prefix) - fig.write_html(image_filename) - return image_filename, fig + return fig |