diff options
Diffstat (limited to 'gn3/db')
| -rw-r--r-- | gn3/db/correlations.py | 8 |
1 files changed, 6 insertions, 2 deletions
diff --git a/gn3/db/correlations.py b/gn3/db/correlations.py index 07eaa56..ba61bb0 100644 --- a/gn3/db/correlations.py +++ b/gn3/db/correlations.py @@ -502,7 +502,11 @@ def __build_query__( for item in sample_ids) if method.lower() == "sgo literature correlation": return build_query_sgo_lit_corr( - sample_ids, temp_table, sample_id_columns, joins) + sample_ids, # type: ignore + temp_table, + sample_id_columns, + joins # type: ignore + ) if method.lower() in ( "tissue correlation, pearson's r", "tissue correlation, spearman's rho"): @@ -580,4 +584,4 @@ def fetch_all_database_data(# pylint: disable=[R0913, R0914] with conn.cursor() as cursor: cursor.execute(f"DROP TEMPORARY TABLE {temp_table}") - return (trait_database[0], trait_database[1]) + return (trait_database[0], trait_database[1]) # type: ignore |