diff options
Diffstat (limited to 'gn3/db')
| -rw-r--r-- | gn3/db/genotypes.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/gn3/db/genotypes.py b/gn3/db/genotypes.py index 0e19a5f..6f867c7 100644 --- a/gn3/db/genotypes.py +++ b/gn3/db/genotypes.py @@ -50,8 +50,8 @@ def __load_genotype_samples_from_geno(genotype_filename: str): gzipped_filename = f"{genotype_filename}.gz" if os.path.isfile(gzipped_filename): - with gzip.open(gzipped_filename) as genofile: - rows = __remove_comments_and_empty_lines__(genofile.readlines()) + with gzip.open(gzipped_filename) as gz_genofile: + rows = __remove_comments_and_empty_lines__(gz_genofile.readlines()) else: with open(genotype_filename, encoding="utf8") as genofile: rows = __remove_comments_and_empty_lines__(genofile.readlines()) |