diff options
Diffstat (limited to 'gn3/computations')
| -rw-r--r-- | gn3/computations/partial_correlations.py | 2 | ||||
| -rw-r--r-- | gn3/computations/qtlreaper.py | 2 | ||||
| -rw-r--r-- | gn3/computations/rust_correlation.py | 2 |
3 files changed, 3 insertions, 3 deletions
diff --git a/gn3/computations/partial_correlations.py b/gn3/computations/partial_correlations.py index 597c5a3..9f02ad2 100644 --- a/gn3/computations/partial_correlations.py +++ b/gn3/computations/partial_correlations.py @@ -17,7 +17,7 @@ import pingouin from scipy.stats import pearsonr, spearmanr from gn3.settings import TEXTDIR -from gn3.random import random_string +from gn3.chancy import random_string from gn3.function_helpers import compose from gn3.data_helpers import parse_csv_line from gn3.db.datasets import retrieve_trait_dataset diff --git a/gn3/computations/qtlreaper.py b/gn3/computations/qtlreaper.py index b61bdae..981a9c8 100644 --- a/gn3/computations/qtlreaper.py +++ b/gn3/computations/qtlreaper.py @@ -6,7 +6,7 @@ import os import subprocess from typing import Union -from gn3.random import random_string +from gn3.chancy import random_string from gn3.settings import TMPDIR, REAPER_COMMAND def generate_traits_file(samples, trait_values, traits_filename): diff --git a/gn3/computations/rust_correlation.py b/gn3/computations/rust_correlation.py index bd6fe97..546da0e 100644 --- a/gn3/computations/rust_correlation.py +++ b/gn3/computations/rust_correlation.py @@ -10,7 +10,7 @@ import csv import os from gn3.computations.qtlreaper import create_output_directory -from gn3.random import random_string +from gn3.chancy import random_string from gn3.settings import CORRELATION_COMMAND from gn3.settings import TMPDIR |