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-rw-r--r--gn3/computations/partial_correlations.py11
1 files changed, 8 insertions, 3 deletions
diff --git a/gn3/computations/partial_correlations.py b/gn3/computations/partial_correlations.py
index 16cbbdb..1cc969c 100644
--- a/gn3/computations/partial_correlations.py
+++ b/gn3/computations/partial_correlations.py
@@ -621,14 +621,19 @@ def partial_correlations_entry(# pylint: disable=[R0913, R0914, R0911]
"status": "not-found",
"message": f"Could not find primary trait {primary_trait['trait_fullname']}"
}
+ cntrl_traits = tuple(
+ trait for trait in all_traits
+ if trait["trait_fullname"] != primary_trait_name)
+ if not any(trait["haveinfo"] for trait in cntrl_traits):
+ return {
+ "status": "not-found",
+ "message": "None of the requested control traits were found."}
+
group = primary_trait["db"]["group"]
primary_trait_data = all_traits_data[primary_trait["trait_name"]]
primary_samples, primary_values, _primary_variances = export_informative(
primary_trait_data)
- cntrl_traits = tuple(
- trait for trait in all_traits
- if trait["trait_fullname"] != primary_trait_name)
cntrl_traits_data = tuple(
data for trait_name, data in all_traits_data.items()
if trait_name != primary_trait["trait_name"])