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-rw-r--r--gn3/computations/correlations.py5
1 files changed, 3 insertions, 2 deletions
diff --git a/gn3/computations/correlations.py b/gn3/computations/correlations.py
index ea1a862..5a9ce62 100644
--- a/gn3/computations/correlations.py
+++ b/gn3/computations/correlations.py
@@ -162,7 +162,8 @@ def fast_compute_all_sample_correlation(this_trait,
corr_results,
key=lambda trait_name: -abs(list(trait_name.values())[0]["corr_coefficient"]))
-def __corr_compute__(trait_samples, target_trait, corr_method):
+def compute_one_sample_correlation(trait_samples, target_trait, corr_method):
+ """Compute sample correlation against a single trait."""
trait_name = target_trait.get("trait_id")
target_trait_data = target_trait["trait_sample_data"]
try:
@@ -200,7 +201,7 @@ def compute_all_sample_correlation(this_trait,
(
corr for corr in
pool.starmap(
- __corr_compute__,
+ compute_one_sample_correlation,
((this_trait_samples, trait, corr_method) for trait in target_dataset))
if corr is not None),
key=lambda trait_name: -abs(