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-rw-r--r--gn3/computations/partial_correlations.py3
1 files changed, 2 insertions, 1 deletions
diff --git a/gn3/computations/partial_correlations.py b/gn3/computations/partial_correlations.py
index fbff4df..95eb5e9 100644
--- a/gn3/computations/partial_correlations.py
+++ b/gn3/computations/partial_correlations.py
@@ -11,6 +11,7 @@ from typing import Any, Tuple, Union, Sequence
import pandas
import pingouin
+from flask import current_app
from scipy.stats import pearsonr, spearmanr
from gn3.settings import TEXTDIR
@@ -320,7 +321,7 @@ def compute_partial(
[__remove_controls_for_target_nones(cont_targ)
for cont_targ in conts_targs])
covariates = "z" if datafrm.shape[1] == 3 else [
- col for col in datafrm.columns if col not in ("x", "y")]
+ col for col in datafrm.columns if col not in ("x", "y")]; current_app.logger.info("DATAFRAME: {}".format(datafrm))
ppc = pingouin.partial_corr(
data=datafrm, x="x", y="y", covar=covariates, method=(
"pearson" if "pearson" in method.lower() else "spearman"))