diff options
Diffstat (limited to 'gn3/computations/rust_correlation.py')
| -rw-r--r-- | gn3/computations/rust_correlation.py | 7 |
1 files changed, 3 insertions, 4 deletions
diff --git a/gn3/computations/rust_correlation.py b/gn3/computations/rust_correlation.py index c2783f1..0539527 100644 --- a/gn3/computations/rust_correlation.py +++ b/gn3/computations/rust_correlation.py @@ -15,7 +15,8 @@ from gn3.settings import CORRELATION_COMMAND from gn3.settings import TMPDIR -def generate_input_files(dataset: list[str], output_dir: str = TMPDIR): +def generate_input_files(dataset: list[str], + output_dir: str = TMPDIR) ->(str, str): """function generates outputfiles and inputfiles""" tmp_dir = f"{output_dir}/correlation" @@ -65,9 +66,7 @@ def run_correlation(dataset, trait_vals: command_list = [CORRELATION_COMMAND, json_file, TMPDIR] - results = subprocess.run(command_list, check=True) - - return results + return subprocess.run(command_list, check=True) def parse_correlation_output(result_file: str): |